Gene Dtox_0808 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_0808 
Symbol 
ID8427746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp821091 
End bp822866 
Gene Length1776 bp 
Protein Length591 aa 
Translation table11 
GC content45% 
IMG OID645033164 
ProductPAS modulated sigma54 specific transcriptional regulator, Fis family 
Protein accessionYP_003190339 
Protein GI258514117 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000794554 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGACAGCAG GGAAAGCAGC CGCAATTGCA AAGGGATCTT CCAGGGAAGC CGTACAGGCA 
CATGATTTTC ATGCGCACGA ACTGATAGTA AAAGAAGTGC CGGTTCTCAA TGCCATTTAC
AATGTTGTAA TTGCTGTTGA TTATTCCGGC AAAATTATTG TTTATAACCA CGGTTGTGAA
CGGCTGTTTA AGGTTCCGGC GGAAAAAGCG ATGGGACGCT TTGTATCGGA GGTAGTCCCC
ATGACCGGTT TGTTAAAGGT TTTAAAAACC GGTAATTCGC ATATAGGTCG TAAATTTGTA
CAGGGAAATT CTCTTTATAT TGTTAACAGG ACTCCGATTT TACATGACAA CAAGGTTGTC
GGAGCAGTAG GTGTGGCACA GGACATTACG GAATTGCAGC AGATAGCCAA CGAGCTGAAT
TCTGTCAATG AGATGAAATC AACTTTAGAA ACCATAATAG ATACAGGACA TGACGGTTAC
CTGGTAGTCA ATAAGGAAGG GTATGTCATA ACGCTGAACA AAGCATATGC TGAGTTGATC
GATATTAACC CTGAAGATGC TATCGGAAGG CATATAAAAG AAGTAATTCC TGAGACAGAA
TTGCATCTTG TATCTCAAAC AGGTAAAACG CAAATCGGCG AGGTTTTGAG AGTTAAAGGA
CGGGAAGCAG TGGTTATGCG CTACCCGATA AATAAAGACG GGCGGATTAT CGGTGCCGTC
AGCAAGGTAA TGTTCAGGGA TGTCAATCAG TTCATTACCT CGGCTAAAAC AGTCTATTCT
TCACAAAGGC GTATTAAAGG TGAGCCTGAA CAGTGGGCCA GTGCCCGCTA TACAGTTGAC
AATCTAATAG GTAAAAGTCA TCCCATGCTG CGGCTGAAAG AAACAGTCAG GCGGGTGGCT
TTAGGTCCCT CCACTGTATT GATTCGCGGT GAGAGCGGTA CAGGTAAAGA GCTTTTGGCT
CATTCCCTGC ATGTTGGATC TAATCGCTGC CTGGGCCCGT TTGTTAAGGT TAATTGCGCC
GCTGTACCGG AAAACCTGTT GGAGTCGGAA TTATTCGGCT ATGTGGAAGG GGCTTTCACC
GGAGCTAAAA AAGGCGGGCA AATAGGCAAA TTTGAGCAGG CTAACGGGGG CACTATTTTC
CTTGATGAGA TAGGGGATAT GCCGCTTTTA ATGCAGGCCA AGCTATTAAG AGTGCTTCAG
GAGAAGGAAA TAGAGAGATT GGGCGATAAC CGTGCCCGTC ATGTTGAGGT ACGGGTTGTT
GCCGCTACCA ACCGGCCGTT GGAGCAAATG ATTGCAGACA ATACTTTCCG GGAAGATTTG
TATTATCGCC TTAATGTAGT CACACTGCAA ATACCCTCCT TGCGTGAAAG GATAGATGAT
TTAAAAGACT TGGTTGAATA TTTTCTGGCT AAATATAATC ATGCCTTTGG TCTCAATATA
ACAGGTCTTT CCGCTGATGC CCTTGAGCTT TTTGAAAATT ACAATTGGCC GGGCAATGTG
CGGGAGTTGG AAAATGTGGT GGAAAGAGCT TTTAATCTGG TTGACGGGCA TATCATTGAT
GTGATGCACC TGCCGCCTTA TTTGCAAAAA TTCGGTAAGA GCAAACGGCA CTCAATTAAT
AAGTCGCTTC CCTCGCTGCT CGAACAGGTG GAGAAAGAAG CCATTGCCGA CGCCCTTTCA
GTCACTAACG GCAATAAGAT GCAGGCTGCT AAGATTCTGG GCATATCGCG GGCCTGGTTG
TACAAGAAAA TTGCCCAGTA CGGAATAAAA GCATAA
 
Protein sequence
MTAGKAAAIA KGSSREAVQA HDFHAHELIV KEVPVLNAIY NVVIAVDYSG KIIVYNHGCE 
RLFKVPAEKA MGRFVSEVVP MTGLLKVLKT GNSHIGRKFV QGNSLYIVNR TPILHDNKVV
GAVGVAQDIT ELQQIANELN SVNEMKSTLE TIIDTGHDGY LVVNKEGYVI TLNKAYAELI
DINPEDAIGR HIKEVIPETE LHLVSQTGKT QIGEVLRVKG REAVVMRYPI NKDGRIIGAV
SKVMFRDVNQ FITSAKTVYS SQRRIKGEPE QWASARYTVD NLIGKSHPML RLKETVRRVA
LGPSTVLIRG ESGTGKELLA HSLHVGSNRC LGPFVKVNCA AVPENLLESE LFGYVEGAFT
GAKKGGQIGK FEQANGGTIF LDEIGDMPLL MQAKLLRVLQ EKEIERLGDN RARHVEVRVV
AATNRPLEQM IADNTFREDL YYRLNVVTLQ IPSLRERIDD LKDLVEYFLA KYNHAFGLNI
TGLSADALEL FENYNWPGNV RELENVVERA FNLVDGHIID VMHLPPYLQK FGKSKRHSIN
KSLPSLLEQV EKEAIADALS VTNGNKMQAA KILGISRAWL YKKIAQYGIK A