| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_0805 |
|---|
| Symbol | |
|---|
| ID | 8427743 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum acetoxidans DSM 771 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013216 |
|---|
| Strand | + |
|---|
| Start bp | 818000 |
|---|
| End bp | 818506 |
|---|
| Gene Length | 507 bp |
|---|
| Protein Length | 168 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 645033161 |
|---|
| Product | RNA methyltransferase, TrmH family, group 2 |
|---|
| Protein accession | YP_003190336 |
|---|
| Protein GI | 258514114 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0219] Predicted rRNA methylase (SpoU class) |
|---|
| TIGRFAM ID | [TIGR00185] rRNA methylase, putative, group 2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.309509 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCATATTG TTTTAGTTGA ACCGGAAATT CCAGCCAATA CAGGCAATAT CGTGCGCACC
TGTGCCGCTA CCTCTTCTGT TTTGCATCTG GTGCGCCCTT TGGGGTTTTC TACTGAGGAT
AAATATTTAA AACGGGCGGG TCTGGATTAC TGGTATTTAG TAGAGATATA TTATCACGAC
AGTTTTGAGG CTTTAAAGGA AAAATACCCG CTTGGCACTT TTTATTATGT CAGTACCAAG
GCTGCCAGGC ACTATTGTGA TGTTGAGTAC GGTCCTGGTG ATTTCTTGGT ATTTGGCAAG
GAAACCAGAG GATTGCCGGA AAGTTTATTG CAGGCCAACA GCGGGAACTG TGTGCGCATA
CCCATGGTTT CTGACGCCCG CTCGTTAAAT TTAGCCAATT CTGTAGCTAT TGTTTTATAT
GAAGCCTTAA GACAGCAGGC TTTTGCCGGC TTAGAGACAG CAGGCAGGGT CAACCCGCAA
TTGCAAGGTA CTTGTACGAA GCCTTAA
|
|---|
| Protein sequence | MHIVLVEPEI PANTGNIVRT CAATSSVLHL VRPLGFSTED KYLKRAGLDY WYLVEIYYHD
SFEALKEKYP LGTFYYVSTK AARHYCDVEY GPGDFLVFGK ETRGLPESLL QANSGNCVRI
PMVSDARSLN LANSVAIVLY EALRQQAFAG LETAGRVNPQ LQGTCTKP
|
|---|
| |