| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_0767 |
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| Symbol | |
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| ID | 8427705 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum acetoxidans DSM 771 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013216 |
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| Strand | + |
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| Start bp | 778002 |
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| End bp | 781838 |
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| Gene Length | 3837 bp |
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| Protein Length | 1278 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 645033125 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) |
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| Protein accession | YP_003190300 |
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| Protein GI | 258514078 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.74653 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAAAC AAGAGGAGAT CAGTAATTTT AAGGACGAGA GAGAAAGGGA GTTATTTCGC
CGGTATGCCA ACTTGGTTAA GTATGCCAAC GATATGATTT TTCTCCTGGA CCACAATTTA
AACATTATAG ATTTCAATGA TCGTACCTTG TCATCATATG GATATTCCTC TGAAGAACTT
TTGAGCTTGA GCATGAAGAA TATAAGGTAT ATTGAACGGG AGACTACGGA TGAGCAGTTT
GAACTGGTAG AGGAAAAAGA CGGTCTGGTC TTTGAGGATG TACATCAAAG AAAAGACAGT
ACTACTTTTG CGGTTGAAAG CAGTGTGAAG TTTATAGAAT CCGATGGAAA AGGTTATTAT
TTGCTCTATA ACCGGGATAT AACACATCGC AAAGAAAGAG AATTGCGCTC CTTTATCAGA
AATGAACTGC TCAAATTGTT TGTTCAAAAG ACATCCCGAA AAAAATATCT TGATGCAGTG
GTGCAATTAT TCCGCGATTT CACTTCTTGC TGCTGTGTTG CTGTAAGAAT TTTAGATCGG
GACGGCACTA TTCAGTATGA AGCAAATGTT GGTTTTAGCC AGGAGTTCTG GCGATCTGAA
AACTTAGTAT CAGTTAAAGA TGATAACTGT GTTTGCACCA GAGTAATTCT GGGTCTCAAG
GAAGAACATG AGTTATCCTG CTTAACAAAG TCGGGTTCTT TTGTTTGTAA TAATACGGCG
GATTTTCTGG CTAAACTTCC CGAGTCTAAA CCGGATATTT ATCGCGGAGT GTTTATGAGA
AGTGATTTTA AATCTCTGGC CCTTATACCT ATAAAATATA GGGATAAGGT GATTGGCCTA
GTTCAGTTGA TTGATTTAAG GGAAGGCAAG TTTACTGTTG AAACAGTAGA TTTCATTGAG
AAGATGTGTC CGGTTATTGG AGAGGCTATA CATAGATTTA ACCTGGAAGA AGAGCTCAAG
CGTAATTATG ATCTGCAAGC GGTGAGCAAT TCTCTGCTCA GTTATTCCTT GCAGGAGAAC
AGCCTGGAAG AAGTTCTTCA GCAGGCGCTT AACCTGCTGC TGGATATTGA CTGGCTAAAC
TTTGAGTCAA AAGGCAGTAT TTATTTGGTA TCAGATAAAA ATAATGACCT GGTTATGAAA
GCCAGTACCG GGTTGGAGGA AAGTATTCTT CATAATGATG CTGTGGGCCT TCCGGCAAAA
GAAGAACCTG AATGCGGGCA TTACTGTATC CCTATTTTAT CCTCCGGCAA CCTTTTGGGA
GTGATTAATC TTTATTTAAA AACAGGTTAC CAGTGTAATT GCGGATTGGA AAAGTTTCTT
TCTTCTGTTG CCAATACACT GGCTCTTATT ATAAAGCGTA AACAGGCGGA AAAGGGTCTT
CGAGAGAGTG AAGAGTTATT TCGCACACTG GTTAACTCAA TGGATGATAT TATCTTTACT
TTAGATAATA ACCAGAATTA TGTAGGCGTT TATGGTAATG GAATAAGAAG GAGTGGAATC
GACCCCGATC AAATAATTGG CAAAACGCCA ATGGATGTTT ATGATTTAAA ATCAGCGGAG
ATTCACATGT CGGCCAATCA GAGCGTATTG ACAGGAAAGA GTCTGGCTTA TGAATGGTCT
GCAGATACAC CCGGTGGGAT AAAATACTAC CAAACCTTTT TATCGCCGAT GAAAAATGAT
GAAAAAATTA CCGGACTGGT GGGAGTTACA CGTGAAATCA CCGAGGTGAA AAGAATTGTC
AATGCTTTAA GAGAAAGTGA GGCCGGTTTA GCTAAAGCTC AGCGCATTGC CCGGGTGGGA
AACTGGGAAT GGGATATCGA AAATGATAAA ATTTATTGGT CGGACGAAAT ATACCACATG
CTTAATATGA AAACAGGTGA ATTTGGCGGC AATTTTGAAT CGCTTATGGA TTTTATACAT
CAGGATGATA GGGACGAGTT TAAAAAATCT ATAGAAATAG CCTTAAATGA AAATAAACGA
AGCTGCATTG ATTATCGCAT AATTACTCCG GGTGGGGTTA TTCGTGCGGT GTATGGTCAG
GGGGAAGTCA TTTTTAATGA GAGAGGCAAG CCGGTTCGTA TGTTTGGCAT AGTCCAGGAT
ATCACGGAGC GCAAGAAAAA TGAAGAAAAA CTTCACATGG CCCGTCAGCA GCTTTTAGAT
ATTATAGAGT TCTTACCTTT TGCCACTTTT GTTGTTGATG GCAGGAAAAC AGTTATTGCC
TGGAATAAGG CTATGGAGGA ACTTACAGGT GTCAGTAATG CTGAAGTTTT CGGTAAGGAT
GATTATGCGG AGCATTTATT TGGCTACTCA AGGCCCTTAT TGACTGACCT GATTTTTTGT
GAGGATAAGG AAACTGAAGC TCTCTATGAG TTTATAGAGA GAAAAGGAAA TACTTTATAT
GCAGAATCCC ATGTCAATTT TATCAAAAAA TCTACTGAGA TTGTTATGTG GGCTTCCGCT
TCACCGTTGT TTGACAACGC GGGTAATTTA GTGGGTGCCA TAGAGACTAT ACGGGATATC
ACTGAACGCA GAAATATGGA GAAGGAACTC AAATACTTAG CTTCACATGA TTTCTTAACA
GGTATCCACA ACAGGTATTC CCTGGAAAAA TGTCTTGAGC AAGCAGTAAA AAAAGTGGCG
GAAGGAGTGA AGAGCGCACT CTTATTTATA GATCTGGACA ATTTTAAGCT GGTTAATGAC
ACGCTGGGTC ACGCGGCCGG TGACCAGTTG TTGAAAACAT TGTCAGCTAC TATCGGAAGT
TTTTTGCAGG GAGGTCACCG CATTTTTCGC TTCGGTGGTG ATGAATTTGC TGTTCTTCTG
GAGAATGTAA CTGTGGAGGA GGCTGGAATG ACAGCCGAGA ATTTGCGCCT CCTGATTGAG
GAACACGAGT TTTGCCTGAC TATGTATAAA ACCTGTTTTA ACATGACTAT AAGCATAGGT
ATAGTAATAA TTGATGGTAT CCTGGACTTT CATAAAATCC TTGCCTATGC CGATAATTCA
CTGTATAAGG CCAAGGAAGG CGGCAGGAAC AGGGTTGTCT TTGCTCAGGC AGGTGATGAT
GTGACTGCCC GCATGTCAGA AACAAATCAT AAAATAGCTT TAATTAAAAC TGCTTTAAAG
GAAGACCGGT TCATACTTTA TTTACAGCCG GTGGTGAGAA TGAAGGACGG CAAAATTACC
CATCACGAAA CACTTATTCG TATGCTTGGA GATAACGGGG AAATAATTTC CCCGAATTAT
TTCCTTACCG TAGCGGAACG TTTCGGTTTG ATAGCGCAAA TTGACCGCTG GGTGGTGCAG
GCGGCAATGA AATTACTCAT GGAATATCCT GATTTAAAAC TGTTTATTAA CCTTTCCGGT
GTCAGTATGG GCGATATGTC CTTACTTGAT GCTATAGAAA AAGATATTAT CGGCAGCAAT
CTTGATACGT CCAGGATAGG TTTTGAGATA ACTGAAACCT CCGCCATGAG AGATATCAGA
CAGGCGGAAG AGTGGATTGG AAGAATTAAA AAATTGGGCT GTTCCTTTGC CCTGGATGAT
TTCGGCGTGG GTTTTTCATC CTTCTCTTAT TTAAAAATCC TTCCGGTGGA TTATCTGAAG
ATAGACGGTA CTTTTGTGTG CGATATATAT AAAGATTCAA CTCATGCGGC GCTGGTGTCT
TCCATGAATA CTATAGCCAG GACTCTGGGC AAAAAAACTA TAGCTGAGTT TGTGGAAAAT
CAGCAAATAA TAAACATGCT CATAGAAATT GGGGTGGAAT ACGGTCAAGG ATTTTACCTG
GCTGAACCGT CACCAGTACC GGCGACCGGT TGGATCAAGA AAGATGTAGA AATATGA
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| Protein sequence | MSKQEEISNF KDERERELFR RYANLVKYAN DMIFLLDHNL NIIDFNDRTL SSYGYSSEEL
LSLSMKNIRY IERETTDEQF ELVEEKDGLV FEDVHQRKDS TTFAVESSVK FIESDGKGYY
LLYNRDITHR KERELRSFIR NELLKLFVQK TSRKKYLDAV VQLFRDFTSC CCVAVRILDR
DGTIQYEANV GFSQEFWRSE NLVSVKDDNC VCTRVILGLK EEHELSCLTK SGSFVCNNTA
DFLAKLPESK PDIYRGVFMR SDFKSLALIP IKYRDKVIGL VQLIDLREGK FTVETVDFIE
KMCPVIGEAI HRFNLEEELK RNYDLQAVSN SLLSYSLQEN SLEEVLQQAL NLLLDIDWLN
FESKGSIYLV SDKNNDLVMK ASTGLEESIL HNDAVGLPAK EEPECGHYCI PILSSGNLLG
VINLYLKTGY QCNCGLEKFL SSVANTLALI IKRKQAEKGL RESEELFRTL VNSMDDIIFT
LDNNQNYVGV YGNGIRRSGI DPDQIIGKTP MDVYDLKSAE IHMSANQSVL TGKSLAYEWS
ADTPGGIKYY QTFLSPMKND EKITGLVGVT REITEVKRIV NALRESEAGL AKAQRIARVG
NWEWDIENDK IYWSDEIYHM LNMKTGEFGG NFESLMDFIH QDDRDEFKKS IEIALNENKR
SCIDYRIITP GGVIRAVYGQ GEVIFNERGK PVRMFGIVQD ITERKKNEEK LHMARQQLLD
IIEFLPFATF VVDGRKTVIA WNKAMEELTG VSNAEVFGKD DYAEHLFGYS RPLLTDLIFC
EDKETEALYE FIERKGNTLY AESHVNFIKK STEIVMWASA SPLFDNAGNL VGAIETIRDI
TERRNMEKEL KYLASHDFLT GIHNRYSLEK CLEQAVKKVA EGVKSALLFI DLDNFKLVND
TLGHAAGDQL LKTLSATIGS FLQGGHRIFR FGGDEFAVLL ENVTVEEAGM TAENLRLLIE
EHEFCLTMYK TCFNMTISIG IVIIDGILDF HKILAYADNS LYKAKEGGRN RVVFAQAGDD
VTARMSETNH KIALIKTALK EDRFILYLQP VVRMKDGKIT HHETLIRMLG DNGEIISPNY
FLTVAERFGL IAQIDRWVVQ AAMKLLMEYP DLKLFINLSG VSMGDMSLLD AIEKDIIGSN
LDTSRIGFEI TETSAMRDIR QAEEWIGRIK KLGCSFALDD FGVGFSSFSY LKILPVDYLK
IDGTFVCDIY KDSTHAALVS SMNTIARTLG KKTIAEFVEN QQIINMLIEI GVEYGQGFYL
AEPSPVPATG WIKKDVEI
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