| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_0763 |
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| Symbol | |
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| ID | 8427701 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum acetoxidans DSM 771 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013216 |
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| Strand | + |
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| Start bp | 772382 |
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| End bp | 774415 |
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| Gene Length | 2034 bp |
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| Protein Length | 677 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 645033121 |
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| Product | DNA ligase, NAD-dependent |
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| Protein accession | YP_003190296 |
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| Protein GI | 258514074 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
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| TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000192603 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.836157 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGAGTTGA AGGAAGCCGG GAAAAGAGTT TTAGAACTGC GGCGGGAAAT AGAGGAGCAT
AATTATAATT ACTATGTTAT GGATAACCCT GTCATAGGAG ACGCCGAATA TGATCGTTTA
ATGCTTGAGC TGACAGCGTT GGAGCAGCAG TTTCCGGATC TGCTTAGCGA GCATTCACCG
ACTCAGCGGG TGGGTGGAAA GCCAAAGGAA GGTTTTACTA CCGTAACTCA TAGAGTGCCT
ATGTTAAGCC TGGCCAACTC TTTTAGTGAG CAGGAGCTGA AGGATTTTGA CCGTCGGGTC
CGCGGTGCTC TGGCAGGTGA AGAGGTTAAC TATGTAGTTG AGCTTAAAAT TGACGGACTG
GCTGTTTCCC TGTTTTATGA GAACGGTCTG TTTCAACGCG GCGCTACCAG AGGAGACGGT
GAAACAGGTG AGGATATTAC CGAAAATCTT AAGACTATTC GCAGCCTCTC TCTGCAACTG
AAAGAGGCCG TGCCGGTTCT GGAAGTGAGG GGTGAGGTGT ATATGTCCGG GGAGGCTTTC
AGACGGTTGA ATAAAAGCCG GGAAGCGGAA GATCAACCCT TGTTTGCCAA TCCCCGCAAC
GCCGCGGCAG GCTCACTCAG GCAGCTCGAT CCCAGGATAA CTTCCAGCAG GCAATTGTCT
GCCTTTATTT ACGCGGTTGG TTATTATGAA GGGGTGAGCC TGAGCGGTCA CGAAGAGGCG
TTGCGTTACT TGCAAGACTT GGGCTTTCCG GTTAGCCGTT ATTATCGCAA ATTTGCTGAT
ATTGAGGAGG TTCTGGCCTA TTGCCGGGAT TGGGAGGCCA GGCGTTTTGA ACTGCCTTTT
GCCATTGATG GTTTAGTCAT TAAGGTTGAT TCCCTGGAGC AGCAGCTAAA ATTGGGAGCT
ACTGCCAAAA GCCCCCGCTG GTCGATCGCT TATAAATTTC CTCCCGAGCA GGCGGTTACT
AAGGTTAAGG ATATTATAAT AAATGTTGGC CGTACCGGTG TTCTCACGCC AACTGCTCTT
TTGGATCCTG TGCGTTTGGC CGGGTCGACT GTCAGCCGGG CGACTTTACA TAATGAAGAC
ATTATAAAGG AAAAAGATGT GCAGATAGGT GATACTGTTG TTGTCCAGAA GGCGGGCGAG
ATCATACCTG AAGTAGTCAG GGTATTGTCG GAAAAACGCA GCGGCGGGGA GATTCCCTTT
AAAATGCCGC AGTATTGTCC TGATTGCGGA GCAAAGGTTG TTCGCCTGGA GGGTGAGGCT
GCTTCCCGCT GTACGGGTAT GGCCTGTCCG TCGCAGCTGA GGGAGGGTTT AATTCACTTT
GTTTCGCGGG GAGCCATGGA TATAGCCGGA CTGGGACCGG CAGTTATCAC ACAGCTCTTA
GATACAGGCT TAATCCATGA TGCCGCTGAC TTATATAATT TGCGGTACGA GGACCTGGTT
AATCTGGAGA GGTTTGGCCA AAAGTCAGTT CAGAATCTGC TGCAGGCCCT GGAGCAAAGT
AAAAAAGCCT CTCTGGGCAG ACTGATATTT GCTCTGGGTA TTCGCCATGT GGGGGAGAGG
GCGGCTAAAA CTCTGGCCCG GCATTTTGGT TCGCTGCAGA ATTTGATGGC AGCCGGGCTT
GAAGAGTTGG TGGGAATACC GGAGATTGGT ACTAAGATAG CCGGGAGTAT TATTACTTTT
TTTGAGCAGG AGCAGAACCT TTCTGTTGTT GATAAACTGG TGCGGGCCGG TGTAAATATT
GTGGAAAAAG ACACAGAGGC TTCAACTGCC GGTTCTTTGG AAGGTAAAAC TTTTGTTTTA
ACCGGAACAC TCCGGTCTTT TACCCGTGAG ACTGCAAAAC AGTTTATTGA GGGCTTGGGA
GGTAAGGTAA CTGCATCTGT CAGCAAAAGC ACTGATTATG TTCTGGCAGG TGAGAATCCC
GGCAGTAAAT ATGATAAGGC CGTTAAATTG GGTATTAAAG TTATAGATGA GGCTTATTTT
AAAGAATTAT CTGTTGGCAA ATCACCCGGC AAAGCAGATC ATAGCCTATC GTAA
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| Protein sequence | MELKEAGKRV LELRREIEEH NYNYYVMDNP VIGDAEYDRL MLELTALEQQ FPDLLSEHSP
TQRVGGKPKE GFTTVTHRVP MLSLANSFSE QELKDFDRRV RGALAGEEVN YVVELKIDGL
AVSLFYENGL FQRGATRGDG ETGEDITENL KTIRSLSLQL KEAVPVLEVR GEVYMSGEAF
RRLNKSREAE DQPLFANPRN AAAGSLRQLD PRITSSRQLS AFIYAVGYYE GVSLSGHEEA
LRYLQDLGFP VSRYYRKFAD IEEVLAYCRD WEARRFELPF AIDGLVIKVD SLEQQLKLGA
TAKSPRWSIA YKFPPEQAVT KVKDIIINVG RTGVLTPTAL LDPVRLAGST VSRATLHNED
IIKEKDVQIG DTVVVQKAGE IIPEVVRVLS EKRSGGEIPF KMPQYCPDCG AKVVRLEGEA
ASRCTGMACP SQLREGLIHF VSRGAMDIAG LGPAVITQLL DTGLIHDAAD LYNLRYEDLV
NLERFGQKSV QNLLQALEQS KKASLGRLIF ALGIRHVGER AAKTLARHFG SLQNLMAAGL
EELVGIPEIG TKIAGSIITF FEQEQNLSVV DKLVRAGVNI VEKDTEASTA GSLEGKTFVL
TGTLRSFTRE TAKQFIEGLG GKVTASVSKS TDYVLAGENP GSKYDKAVKL GIKVIDEAYF
KELSVGKSPG KADHSLS
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