| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_0688 |
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| Symbol | fliF |
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| ID | 8427626 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum acetoxidans DSM 771 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013216 |
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| Strand | + |
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| Start bp | 703818 |
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| End bp | 705356 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 645033050 |
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| Product | flagellar MS-ring protein |
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| Protein accession | YP_003190225 |
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| Protein GI | 258514003 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
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| TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCCGC GTGAACTGCT GGACCGGTTA AAACAGCGCT GGCAGAGTTT AAGCCAGGTA
AAGAAGGCTT TTGTTATTAT TGCCGGTACC GGTATATTGG CGGCGACATT ATATTTGATT
ACATTTTTAA CTCAAACATC TTATACTCCG CTTATGACAA ACCTTGAACC CAGAGATGCC
GGTGCTATTG AGGAAAAACT GAAATCGTTG AAATATGAAG ACTTTAAGCT GGCTGATCAG
GGTACAACTA TTATGGTGCC TAAAGAACAG GTCTATGAGA TACGCATAAA ACTGGCCAGC
AGCGGGGTTT TGCAGGGGGG CGGTTTGGGG TTTGAGTTGT TTGATCAAAA CCAAATGGGC
GTATCTGATT TTGAGCAGCA GGTGGATTAT CAGAGGGCGC TGCAGGAGGA GTTAAGGCGG
ACAATCATTC AGTTGGAAGA AGTTGAGCAG GCCCGTGTGC ATTTGGTTCT TCCCCAAAAA
AGTGTTTTTG TGGATGAACA GGAGCCCGCT TCTGTTTCTA TAGCTCTAAA ATTAAAGCCT
CTGGCTAAAT TAAAGCCTGA GCAAGTAAAG GGAATTGCTG ATCTGGCGGT TGGCAGTATA
CAGGGACTTA AGCTGGAAAA CGTGCATATT ATAGATATGC AGGGACATAT TTTAAGCGAC
ACTATTGACA CTGAAAATGA TGAAGACTCC TCTCAAGTCA TTAATAAACA GCAGCAGGTT
AGGCGCGAGT ATGAAAAAGA ACTGGAGAAG CGTATTCAAA ACGTTTTGGA TAGGGTTTTA
GGTACGGACA AGGCAGTTTC CATGGTAACT GCGGAAATGG ATTTTAATAA ACAGGAAATT
AATACGACTA CTCACGGGCC GGGTCAGAAA GTCAGTGAGC AGCTTATAAA TGAAAAGAGC
CAGGGTACGG GTCTTGGAGG TGTAACCGGT ACAGATGCTC AAAACACGCA GACCTACCCA
ACAGGCACAG ACAATGTGGA AAGCGCTTCA CGGGATGAGT CAATAACTAA CTATCAGGTT
GACACTACAC AGCAAAAAGT AGTCCAGCCT CCCGGCACGA TTAAGAAACT GTCTACATCC
GTGGTGGTGG ACGGCAAACT GTCCGCTACC CGTATTCAAC AGATAGAATC CCTTGTATCA
ACGGCTATCG GCTATGATCA GGCCAGAGGA GATCAAATTA ATGTTACCAA CATAGCTTTT
GACACCAGTT ATCAGGATAA GATGCAAGCT GAAATGGGTA AGGAAGAAAC TTTGGCTGCG
CAAAAACAGC GCCAGCAGCT CATATACTTT GCTATTGCAG GAGCGGTAAT TTTTCTCATA
ATGTCCGCGT TTTTGATTGC TTACATGCGC AGGCGCAGGA GACAGCAGCA GGAAGACACT
CTGGAAGAAA GTATCAAAAG CGTGCAGGAT CTGATTGAAG AAGAGCAGGA ATTAGAGGTT
AAATATATAG ATGTGAAGCA TGATCAGATT AAAAAGCTTG CTAAGGAAAG GCCGCAGGAT
ATAGCTGAGA TTCTTAAGAT ATGGCTGTCC GAGGGATAG
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| Protein sequence | MTPRELLDRL KQRWQSLSQV KKAFVIIAGT GILAATLYLI TFLTQTSYTP LMTNLEPRDA
GAIEEKLKSL KYEDFKLADQ GTTIMVPKEQ VYEIRIKLAS SGVLQGGGLG FELFDQNQMG
VSDFEQQVDY QRALQEELRR TIIQLEEVEQ ARVHLVLPQK SVFVDEQEPA SVSIALKLKP
LAKLKPEQVK GIADLAVGSI QGLKLENVHI IDMQGHILSD TIDTENDEDS SQVINKQQQV
RREYEKELEK RIQNVLDRVL GTDKAVSMVT AEMDFNKQEI NTTTHGPGQK VSEQLINEKS
QGTGLGGVTG TDAQNTQTYP TGTDNVESAS RDESITNYQV DTTQQKVVQP PGTIKKLSTS
VVVDGKLSAT RIQQIESLVS TAIGYDQARG DQINVTNIAF DTSYQDKMQA EMGKEETLAA
QKQRQQLIYF AIAGAVIFLI MSAFLIAYMR RRRRQQQEDT LEESIKSVQD LIEEEQELEV
KYIDVKHDQI KKLAKERPQD IAEILKIWLS EG
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