Gene Dtox_0611 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_0611 
Symbol 
ID8427546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp637435 
End bp639486 
Gene Length2052 bp 
Protein Length683 aa 
Translation table11 
GC content41% 
IMG OID645032976 
ProductCheA signal transduction histidine kinase 
Protein accessionYP_003190154 
Protein GI258513932 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0643] Chemotaxis protein histidine kinase and related kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.527763 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGACA ATTTTAGCAG CGATCCCATG CTTGAGATGT TTATTTTTGA AACTAACCAG 
TTTACTGAGC AGTTGGAGCA AATAATTTTA GACAGCGAAA AATCCTGTGG GTTTGATACA
GCTTCAATCA ATGAGATATT TAGAATTATG CATACCATCA AGGGTTCTGC GGCTATGATG
CTATATAATA ATATTTCCGG TTTAGCCCAT TCAATGGAAG ACCTATTCTA TGTTTTGCGA
GAAGAGAAGC CCCGAAATGT AAATTATTCC GGGATAAGCG ATATAGTTCT GGAGGGTGTT
GACTTTATAA AAAATGAAAT TGCAAAGCTG GAAAACGGTA AACCGTCAAC CGGTGATGCT
TTAGCATTGG TTGAAGTAAT TGAAGCTTTT GTAACAAAAA TAAAGTCTTG CAATGATATT
GCGGAAACAC CGGTTAACAC TGCTGCGGAG GAACAGCAGA AATTTTATAT TAGTCCCCAA
GCATTGCCGA TAACAACAGC GAATAACACC TATGAGGCCG TGATAACTTT TGACGAAGGG
TGTGAAATGG AAAATATAAG GGCCTTTTCG GTGGTACATA GCTTAAAAGA AAAAAATGTA
GTTTTAGAGT TTGAGCCGCC AGACATTATT GATAACGAAA ACAGTGCCGG TATAATCAGG
CAGGAAGGTT TTCGTATTGT ATTCCGGACA AACATGACAA TTGAAGAAGC ACGTACCTTG
CTTATTAATG AAACATTATT TTTAAGAGAG CTTGAAATAA ATGTTGTAGA AACTCCAGCT
GAACCGGTTA AAAAGAGAAA AGAAATAGTG CTTGAAGATG ATTTGCCGGA GGATTTGGCT
GTTGCCGGAA GTGTTGAATC CGAGGATGCT CAGCCAGGGA GCAAGCAGAG TTTTATCAGT
GTTAATATCT TAAAGCTGGA CAGGCTTTTA GACTTGGTAG GGGAGTTGGT TATATCGGAA
GCTATGGTAT TACGCAACCC TGAAATAACA GTACTGCAAA TAGAGAGTTT TCAAAAAGCT
GCCAGACAGT TGGAGAAAAT CACTTCCGAA CTGCAGGATA CAGTCATGTC TATTCGTATG
GTGCCTCTAT CCACTACTTT TCATAAAATG AACAGAATTG TTCGGGATAT GAGCAAGAAG
TTGGGGAAAA ATGTACAGTT AGCCATAATC GGAGAGGAAA CAGAGGTTGA TAAGAATATA
ATTGAGCATA TATCTGATCC CCTGATGCAC TTGATACGCA ACGCTGTGGA TCATGGTCTG
GAAACAACTG AGGAGAGGCT GGCTGCAGGC AAACCGGAAA CCGGAACTGT TACACTTGAA
GCAAATAATG AGGGCGGGGA TGTCTGGATT ATTGTCAGGG ATGACGGCAG AGGTCTTAAT
CGCAAAACAA TAATCGAAAA GGCCAGGGAA AGCAGTCTAT TGAAAAAGAA TGAAAATGAG
CTTTCCGAGA GGGAGGTTTA TTCCTTAATC CTGATGCCCG GCTTTTCCAC AAAAGAACGT
GTAACGGAGT TTTCCGGGCG CGGTGTAGGT ATGGACGTAG TGGTTAGGAA CATAGAAAAA
GTTGGAGGGC AGATTTTAAT TGACAGTTCA CCTGGTACAG GTTCAGTAAT TTCTATAAAG
ATTCCTCTTA CCCTGGCCAT TATAAACGGG ATGGCTGTGA AAGTGGGTAA ATCCAGCTAT
GTTATTCCAA CTACTATGAT CAGAGAATCT TTTAGAGCAA GGGAAGAGGA TGTAATTAGA
GACCCTGATA ATAACGAAAT GATATTGATA CGTGGTGATT GCTATCCAAT AATTAGACTG
CATAAATATT ACAAGAAAAA GGAAGCTGTT ACTAATATGC AGGAGGGAAT TATCGTAATG
GTTGAAAATG AGTTCAGAGG AGCATGCCTG TTTGCCGATG AGCTCCTGGG GGAACAGCAG
GTGGTTGTCA AGTCTCTGCC CCGCTACATA AAAAAAGTAA AAGGTATTGC CGGGTGTACT
CTGTTAGGTG ATGGGAGTAT AAGCCTTATT TTAGATGTTG CGAACATAAT AAACCAGGGG
GAGGAGAGGT AG
 
Protein sequence
MSDNFSSDPM LEMFIFETNQ FTEQLEQIIL DSEKSCGFDT ASINEIFRIM HTIKGSAAMM 
LYNNISGLAH SMEDLFYVLR EEKPRNVNYS GISDIVLEGV DFIKNEIAKL ENGKPSTGDA
LALVEVIEAF VTKIKSCNDI AETPVNTAAE EQQKFYISPQ ALPITTANNT YEAVITFDEG
CEMENIRAFS VVHSLKEKNV VLEFEPPDII DNENSAGIIR QEGFRIVFRT NMTIEEARTL
LINETLFLRE LEINVVETPA EPVKKRKEIV LEDDLPEDLA VAGSVESEDA QPGSKQSFIS
VNILKLDRLL DLVGELVISE AMVLRNPEIT VLQIESFQKA ARQLEKITSE LQDTVMSIRM
VPLSTTFHKM NRIVRDMSKK LGKNVQLAII GEETEVDKNI IEHISDPLMH LIRNAVDHGL
ETTEERLAAG KPETGTVTLE ANNEGGDVWI IVRDDGRGLN RKTIIEKARE SSLLKKNENE
LSEREVYSLI LMPGFSTKER VTEFSGRGVG MDVVVRNIEK VGGQILIDSS PGTGSVISIK
IPLTLAIING MAVKVGKSSY VIPTTMIRES FRAREEDVIR DPDNNEMILI RGDCYPIIRL
HKYYKKKEAV TNMQEGIIVM VENEFRGACL FADELLGEQQ VVVKSLPRYI KKVKGIAGCT
LLGDGSISLI LDVANIINQG EER