Gene Dtox_0579 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_0579 
Symbol 
ID8427514 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp598711 
End bp599889 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content39% 
IMG OID645032944 
Producthypothetical protein 
Protein accessionYP_003190122 
Protein GI258513900 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2301] Citrate lyase beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.638889 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTATT TCAGTTGTTT CAGTAAAGAA CAGAAGAAAA AGTTGTTTTT TATACCTCCT 
ACAGAGAGGT CTTTAGATAA CGATAAAAAA ACACTGTCTT ATTCGCTCGG AGCAACCCTT
TATATGCCGG GCAGTTCTAT TCAAGCTGTT AATAAGTTAA TTGAGAATAA AATTCCGGGT
CTGGTATCAA CCGTATTATG TCTGGAAGAC GCGGTCGACG ACAGATATGT TGCCCATGTG
GAAAAGAATC TGAACAGCCA ACTTAAAACC CTGCTTATTA TGGAAAAAAA GGGGAGTTTT
CTCCCCTTCA TTTTTATCAG GGTGCGCAGT TTGGAGCAGT TTGTAAGACT GACAGAGGAT
TACGAAGCCA TACTTCCCAT ATTGAGTGGT TTTGTATTTC CCAAGTTTGA TCACAGTAAC
GGGCATCTCT ACTTTGAACA ACTGGAAAAG ATTAACCGGA AAGCCGGCAA AACATTATAC
GGGATGCCAA TATTAGAAAC ACCCGGTGTA ATTCACCTGG AAAAAAGATA TGAAACCTTA
ATAGAAATTA AAAGTATTCT GGATAAATAT AAAGAATTAG TGCTTAATCT TCGCATAGGT
GTGACGGATC TGTCAGGTTT ATATGGTTTG CGGAGAAGTT GCGAGCTGAC AATATACGAC
ATTGCAGTTA TCCGTGATTT TATAGGCGCT CTGGTAAATA TTTTTGGCAG ACCCAAAGAA
GGCTATGTGA TTTCAGGTCC GGTATGGGAG TATTTTTCTT CGGGGCAGAG AATACTGAAA
TCGCAGCTCA GACAAGGTTA TAACCAGTTT GACAGAGAAT ACCGGAGCAT AAGGGAGAAA
TTGCTGTGTC GTTACATTGA CGGTTTGATT AGAGAAGTGA TGCTGGATAA GGCCAATGGG
TTAATCGGTA AAACGATTAT TCACCCAAGT CATTTGTTGC CGGTTCAGGC GCTTCATGCG
GTTACTCACG AAGAATACTG TGATGCCAAA GATATTCTGT CCAACAATAA TGGAGGGGTA
TCAAAAAGTG TTTACAATAA CAAAATGAAT GAAGCAAAAC CTCATACATA TTGGGCGGAG
AAAGTGCTCA CTCTGGCAAA GATATACGGG GTGTTAAATG ACAAACATGA CTACACAAGC
ATTATCTATG AAGGAGATAA ATTGCAAAGT ATTGGATAA
 
Protein sequence
MSYFSCFSKE QKKKLFFIPP TERSLDNDKK TLSYSLGATL YMPGSSIQAV NKLIENKIPG 
LVSTVLCLED AVDDRYVAHV EKNLNSQLKT LLIMEKKGSF LPFIFIRVRS LEQFVRLTED
YEAILPILSG FVFPKFDHSN GHLYFEQLEK INRKAGKTLY GMPILETPGV IHLEKRYETL
IEIKSILDKY KELVLNLRIG VTDLSGLYGL RRSCELTIYD IAVIRDFIGA LVNIFGRPKE
GYVISGPVWE YFSSGQRILK SQLRQGYNQF DREYRSIREK LLCRYIDGLI REVMLDKANG
LIGKTIIHPS HLLPVQALHA VTHEEYCDAK DILSNNNGGV SKSVYNNKMN EAKPHTYWAE
KVLTLAKIYG VLNDKHDYTS IIYEGDKLQS IG