Gene Dtox_0563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_0563 
Symbol 
ID8427498 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp581613 
End bp583358 
Gene Length1746 bp 
Protein Length581 aa 
Translation table11 
GC content45% 
IMG OID645032928 
ProductABC transporter related 
Protein accessionYP_003190106 
Protein GI258513884 
COG category[R] General function prediction only 
COG ID[COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase 
TIGRFAM ID[TIGR01166] cobalt transport protein ATP-binding subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000790645 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCGGTTT ATGAAATCAA AGATCTGATT TATTATTATC CTGAGGCTGA AAAACCTGCC 
CTGGACAGGA TTAGTCTTGA TATTGAAGAG GGTGAGTTTG TTTTGGTGGC CGGTGGGTCC
GGTTCGGGTA AGTCTTCCCT GGCCAGGGTC TTGTCCGGGC TGCTGCCGGA CTTTTATGGC
GGGCGTTTTG GTGGCAAGGT GTTGTTTAAG GGAACTGATT TGCGCAGTAT GGACCGGCGT
AAGCTGGCGC GAAATGTAGG CATGGTCTTT CAGGATCCGG AGAAACAATT AATAATGACA
GGTGTCGAGG CTGAAATTGC TTTTGGTCTG GAGAATCTTG GTTTACCAAA AAAAGAAATG
ATGCGCCGTG TGGCTGAGGT GATTGGTTTT CTGGATTTAG CGGCAATAAA GCGGGAGTTT
ACCGCTGATC TGTCCGGCGG GCAGAAACAG AAACTGGCCC TGGCTTCTGT TTTGGCTATG
CAGCCGCAGG TCTTAATTTT AGATGAGCCT ACTTCTCAGC TGGATCCTGT GGCAGCGGAA
GATTTTTTTA ATCTAGTTAG AAGATTAAAT GAAGAGATGG GTTTTACTGT TGTCTTAATT
GAGCAAAGGC TGGAAAGGTG CTATCATTTG GCTGACCGGG TATTGCTTAT GGATGGCGGA
AAAATTGTAT GCGCGGGCAG GCCGGATCAG GTGGTTTCCT GGTCGGTTCA AAGAGATAAA
TTTTTTCTTC CCCCGGTAGC CAGGTTCTTT TCTCTAATGG GTTTTTCCAG TGTTCCGGTA
ACCATCAAAG ACGGTAGAAA GAAATTGCGA ATATCATTGA AAGGAAAGCA TTATTCAGGT
CAGGCGGATA AGTGTTTGAT GAATACTCTG AAGAAAAATG TTCCGGCCAA AGCGGAAAAT
AGTATGCCTC CGCTGGCTGA AGTGAAAAAT TTATGGTTTA CCTATTCCAA TGGCAAGGAA
GCATTGCAAA ACATCAATTT ACAAATCCGG GCCGGTGATT TTGTAGTTGT CCTGGGGGAG
AATGGAGCCG GCAAATCAAC TTTGTTAAAA ACAATGACGG GTCTTTTACA ACCGGGGCGC
GGCAAGGTCT TATACCGTGG GGCTGACTTT AACAGAAATA AAGAGCAGTA TATGGGCCGA
AAGGTAGCCT ATCTTTCTCA AAACCCTAAC GACTATCTTT TTCAACGCAC TGTGGAAGAT
GAACTTATGT TTACCTTGAA GAATTGCCAG ATGGAGGACG ACGGTATTGT TGATAAACTA
CTGGCGGATT TATATATAGA TTCTTACAGG AAGGTGAACC CGCGCGATTT AAGCTGTGGA
GAGAGACAGC GGGTGGCCCT GGCTTCGGTG CTGGTAACCA GGCCGGAACT TTTGGTGCTG
GATGAACCGA CCAGAGGAGT AGATTATCAA ATTAAAGCCG ATTTGGGCAA TTATTTGTCC
GGCCAGGCCA AAGCCGGGGT AGGAGTGCTT TTAGTTACCC ATGATGTGGA ATTTGCCGCC
GAATATGCTT CACGGGTAAT TATGATGTTT GACGGTCAAA TAATTTGTGA GGGCACAAAA
CATGAGGTTT TAGGCACGTC AGTATTCTAC TCCCCGCAAA TCTGCAAACT TTGCACCGGC
TATTTTGACA ATATAGTGAC ATTTCAGGAA GCTTTGCAAA AAATCGGGCC TTTGTTATCC
TGCCGGGCAA ATTGCCTTGA TCAAGATAAA GGGAGTGATG GTTTTGAACT CAGACACATA
CAATAA
 
Protein sequence
MPVYEIKDLI YYYPEAEKPA LDRISLDIEE GEFVLVAGGS GSGKSSLARV LSGLLPDFYG 
GRFGGKVLFK GTDLRSMDRR KLARNVGMVF QDPEKQLIMT GVEAEIAFGL ENLGLPKKEM
MRRVAEVIGF LDLAAIKREF TADLSGGQKQ KLALASVLAM QPQVLILDEP TSQLDPVAAE
DFFNLVRRLN EEMGFTVVLI EQRLERCYHL ADRVLLMDGG KIVCAGRPDQ VVSWSVQRDK
FFLPPVARFF SLMGFSSVPV TIKDGRKKLR ISLKGKHYSG QADKCLMNTL KKNVPAKAEN
SMPPLAEVKN LWFTYSNGKE ALQNINLQIR AGDFVVVLGE NGAGKSTLLK TMTGLLQPGR
GKVLYRGADF NRNKEQYMGR KVAYLSQNPN DYLFQRTVED ELMFTLKNCQ MEDDGIVDKL
LADLYIDSYR KVNPRDLSCG ERQRVALASV LVTRPELLVL DEPTRGVDYQ IKADLGNYLS
GQAKAGVGVL LVTHDVEFAA EYASRVIMMF DGQIICEGTK HEVLGTSVFY SPQICKLCTG
YFDNIVTFQE ALQKIGPLLS CRANCLDQDK GSDGFELRHI Q