| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_0562 |
|---|
| Symbol | |
|---|
| ID | 8427497 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum acetoxidans DSM 771 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013216 |
|---|
| Strand | + |
|---|
| Start bp | 580711 |
|---|
| End bp | 581640 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 645032927 |
|---|
| Product | cobalt transport protein |
|---|
| Protein accession | YP_003190105 |
|---|
| Protein GI | 258513883 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0619] ABC-type cobalt transport system, permease component CbiQ and related transporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0105073 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGGGAAA AATTGTTTTA TCAGGAAAAA GGCCTCTTCA TACAAAGCCT GCACCCGTTT
ACATCTGTAG TTTATCTGGG TACGCTGCTA TTCCTGTCCT TAGCCTTTAA CAACCCGCTT
TATTTACTCG GAATATTAAT AATGATTGTT TTAGCGATAT GGGCGGCGGA TGGTTGGAAG
ACCTGGGAAA CATATATGAT AATAAGTTTG CCCATGATAT TGTTGATTAT TGTCATAAAC
CCCTTAATTA ACAGCGCCGG AAAAACTGTT TTATGGTATG GTCCTCATAT TCCGTTTTGG
GGCCGCCTTA ATATTTCTTT GGAAGCTATA TGCTACGGAG CTGCTATGAG CGTCAGGCTT
TTGGATATTA TCAGTTTGTT TTGCCTGTAT AATATAATCG TTCACCCGGA TAAAGTCTTG
AACCTGTTTT CCAGATTTGC AGGTAAATCC ACGCTGGTAA TATCCTTGTC TACCAGGCTG
TTTCCGAGCA TGTTCAGGGA ACTGGAGAAT GTTAAAGATG TCCAGCGGCT GCGAGGTGTT
GACTTCAGAC AAGGGACAAT CAAGGAGAGA ATTAAGAAAC ATTTTTCTTT GATTAATATA
TTGCTTTTGT CTTCTCTGGA AAACTCACTG GGCATAGCAG AATCTATGCA GGCTCGCGCC
TTTGGCAGCG GGCCTCGCTC CGTTTACTCC GCACATATGC TGAGACCGAG AGATATACTG
TGCCTGAGCG GCAGTTCTCT GGCACTGGGA ATAAGTATCT GGGGATTGCT GCGCGGTTTT
GGTATGTATA ATTTTTACCC GCAGCTGGAT TTTTTAATCA ATGATCCGGT AACTGTAGTT
GTGTTGGCTG CTGTTATGTT AAGTTTATCC GTTCCGGTAT TGTTGAGTTG GGGGTGGCAG
TATTGCCGGT TTATGAAATC AAAGATCTGA
|
|---|
| Protein sequence | MREKLFYQEK GLFIQSLHPF TSVVYLGTLL FLSLAFNNPL YLLGILIMIV LAIWAADGWK
TWETYMIISL PMILLIIVIN PLINSAGKTV LWYGPHIPFW GRLNISLEAI CYGAAMSVRL
LDIISLFCLY NIIVHPDKVL NLFSRFAGKS TLVISLSTRL FPSMFRELEN VKDVQRLRGV
DFRQGTIKER IKKHFSLINI LLLSSLENSL GIAESMQARA FGSGPRSVYS AHMLRPRDIL
CLSGSSLALG ISIWGLLRGF GMYNFYPQLD FLINDPVTVV VLAAVMLSLS VPVLLSWGWQ
YCRFMKSKI
|
|---|
| |