Gene Dtox_0559 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_0559 
Symbol 
ID8427494 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp574935 
End bp578441 
Gene Length3507 bp 
Protein Length1168 aa 
Translation table11 
GC content45% 
IMG OID645032924 
ProductS-layer domain protein 
Protein accessionYP_003190102 
Protein GI258513880 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGAGAA AAAACACAAA ATTACAATTC ATAACGTTAT CAGTAATGAT ATTTTTTATC 
CTGAACATTA TTCAGTTTTC CGGATTAACC AGCCAGTCAG CAAACGGGCA AGAGGCTGTA
TATACTTCTG CTGAAATGGC GGCAAAAGCA GTTGATTTTA TTAACGATAA GTATAAGGCG
GGAGAGAAAA TTGATGGCTA TACCGCTTAT GTGCTGGCTA TGGCCGGGCA GGATTTGTCA
AGTGAGAAAT GGAGCATAAA CGGCACTAGT TTAAGAAGTG AAATCGAAAA CTTAGCCGAC
TTAATGGGAA ATAATGTTAA TTTAATAAAT TATGTTTGCT TAACCCAGAA TAATGACGGC
AGTTTCGGCC CTTATGCCAA TGAATATGGG ACAAAGGTGC CGCTGCAGGC TTTGTCGACA
GTTAAAGAAG ACATTACTGT CGGCAGCGAT GTTTACAATC AGGTGCAGAG TGCCATTGAT
AATGCTGTAA ACTTTTTTAA GACAAAATAT CAAAACGGCG GCATGACCTA TGATGTAAAC
GGTTGGAGTT TCGATTACCG CTGTGTTGAG GCACTGGCAA AATCGGGGGA GGACCTGTCA
GTGGGCGGTT GGGTCTATAA TGGTGTATCC CTCAAAGACA GCATAATGCT TTCTGCCAAT
AGTACGGCGC GGTCCATTAA AAAGGATTCA TCTGTACAGG ACGCTGTGTA TCTGTCCAAA
GAACTTACGG CTCTTTATGC TGTTGACAAA GCTTCAACCG ACATTGATGT TCTGGCCGGT
GCGATTACAG CCAAACAAAA TGGTGACGGC AGTTTCGGGA CAAATATGTT TGACCATATT
ATGGTTCTGA ATGCTCTCGG AAAAGCTGGA GCAATCAGTA ATATTGACCA GACAAAGGCA
TTTAATTTTA TTGATAATTT GAAAGAAATT CATAAGAACT CCTGGGGTCA AGACGCCGGT
GTAGCCTGGG GCTCACAGTA CACAAGCGGT TTTGAAGAGT CTGATACCAC TGCCCAGGTT
ATTACGGCAC TCAGTTATTT TTCTGAGGCG AAGAACGAAG GCAGCGATGT TTATAAGACT
ATACAGGGTG GTCTTACCTA TCTTAACGAC GTGCAAGATG CTGACACGGC GGCCATAGTC
CGTATAGAAG GTGACAGCAC CTTTTCCTCT GCTGAAACAC TGCTGGCACT CAAGTCACTG
GGATATACTT TTGACCAGTA TACAGGGACT GCTTCAAAAT GGGTGAAAAA TTCCCGGACG
AAAACTATAA CTCAGTGCAT AAAGGCAGTG AACAAATGGG GTGACGCCGG ACGCCTGGAC
AGGCTGATTA GACTTTTGGC AGACCGGCAA AAAGCAGAGG ATCCGGGTAA AGGTTCTTTT
GAAAACAGCG TATACAGCGA TATGTGGGCT TATTTAGCCC TTGGTGAAGC CGGAAAGCTT
GACGGGCTTA ACACCGGCGA TGCTAAAACG TATATTTTAT CTAAGCAGGA TACTTCCGGT
TCCTGGGGAG AAATCTTTGA TCAATACTAC CCTGATTTCC TTTCCACAGC ACAGGCTATC
CGGTCGCTCA GCTATCTGCC GGAAGCCGGT GAGGCAGATG TTCAGGCAGC AATAAATAAA
GGTCTGAATT ATCTGAAAAC CCTTCAGCGG GATGACGGCA GCGTTAGCGC AAAAGATGAT
GACCCTGCTG TAGATAATTC TGAGCTAATC ATAACTTTAA ATAGATTGAA TATAGATCCA
CAAGGTGCTG AATGGACAAA AACTGTTGAT GGCAAAAAAT TTACTCCGGT ATCTTATCTG
ATGAATAACA CAATGAATGC CGATGGCAGC TTTGGCGCAT CTAAAAATGT TTTTGGAGCC
ACTGAAGCAC TTTATGCATA TTTAATTCAG GACGGTACCG GTAACCCTGG CGGAGACGGT
CCAGGAGGCG GCTCGTCTGA GAACCGGTGC AGTGTTAATA TCGCGATAGT GGGAAAGGAC
GACGAAATTA TTTACAGACC GGGCAGTGTT ATCCTGGATA AAACTTCAAA ATGGGGTATT
ACTGCTATGG GCGCACTCCA TGCCACAGGT TTGAGCTATG TAGGCGACAG CAGTTTTGTT
AAGAGCATTG ATGGGCTGGC TAACAGCGGC ATGAACGGGT GGATGTACAG TGTTAACGGG
GTTGTGCCTA TGACTACTGC TTCTGATAAA GTGGTTAAAG AGGGGGATAG GGTAATCTGG
TGGTATAGTA CGGATATGAA TTCATCAGGA CCTAGTTGGG ACAGTCTCTT AAAAGGATCT
GCAGGTGCCG GGGGCAATCA GTCGGCAGCT GCTTCATCAA CTAGCCTCAT TGAGCAAAAT
AAAGAACTTC CAGATGCATT GCAGGTTTCG GAAAAGGCTC TGGCAGCGCT GGAGCAGATA
GCCCTGCTGC TTAATCCTCA AGACATTGAA AAAGAAAATA CATTGGATGC ATCGGTTCAG
GACGACGAGA TTAATAATGT AATTGTAGTA GGCAGCAGGC AGCCTTTAAA TCTGGCTTTG
CTCAAAACAT TAAAAAAGGA ACTGGATCAG AATGAGGTAC AGTTAACACA AAAAGTTGAA
GCGGACAGTG GAGCTGTCCT GTTGGATGCC AAAGAGGAAC TGGCTCTGGT TATTCCGGCT
AAGTCACTTA ATAAGGATAT GGAAATAAAC GTTAAGGAAG CAGCTGCCGG CAATCAGCAG
GAAACTGCCG CACCGTCAGG TTTTCGTCAG GTGTCAGCAA TTTACGATTT TGGTCCCAAA
GATACTGTTT TTACTATGCC GGCGACATTA ACCTTTAAGC TGGTTATGCC TCCTTTGGTT
AAGCCGGATA GACTGGTTTT GGCCTATTAC GATAAAGTTG CCGGCAAGTG GGTATCTGTC
CCTGCTGTTG TGGATTTGGA TAAAGGTTTA GTCCTGACCA AGCTGCGGCA TTTAGGACAA
TATGCGGTTT TTGCCCGCGA GTCTTTGAAG ACCTTTGCTG ATGTAAACGA AACTTCTTCT
AGTTGGGCTA AAGATTATAT AGAAAATCTG GCCGGGGCCG GAATTGTTGA CGGTATAGAT
GCTACACACT TTGAACCGTC AAGAAAGGTG ACCAGGGCAG AATTGACCAG TTTATTGGTT
AAAGCCTTAG GCATATCCAC AGATCAAAGC TCTGCTATCT CTCTGAAGGA TGTTCAAGCC
GATGATTGGT ACGCGGGGGC GGTTGGGGCA GCTCAGGCAG CCGGTTTGAT TACCGGCTAT
GAAGACGGCA CTTTCCGGCC GGGCAACACT GTTAGCCGTG AAGAACTGGC GGTAATTCTG
GTGCGCGCAA TGAAACTTGA GTCTGACCAG GAAAAAATGT GGTTTGCCGA CATAGATAAG
ATTAACTCCT GGGCCAGAGA CAGTGTGTTC ACAGCTTCAT CAAAAGGTCT CATAAAAGGT
TTTCCTGATG GAACTTTTCG TCCTGATGTT GCTGCCGGCC GGGATGAGTG TGCGGTTATA
ATCTTTAGGA TGTTGAATGA ATATTAA
 
Protein sequence
MRRKNTKLQF ITLSVMIFFI LNIIQFSGLT SQSANGQEAV YTSAEMAAKA VDFINDKYKA 
GEKIDGYTAY VLAMAGQDLS SEKWSINGTS LRSEIENLAD LMGNNVNLIN YVCLTQNNDG
SFGPYANEYG TKVPLQALST VKEDITVGSD VYNQVQSAID NAVNFFKTKY QNGGMTYDVN
GWSFDYRCVE ALAKSGEDLS VGGWVYNGVS LKDSIMLSAN STARSIKKDS SVQDAVYLSK
ELTALYAVDK ASTDIDVLAG AITAKQNGDG SFGTNMFDHI MVLNALGKAG AISNIDQTKA
FNFIDNLKEI HKNSWGQDAG VAWGSQYTSG FEESDTTAQV ITALSYFSEA KNEGSDVYKT
IQGGLTYLND VQDADTAAIV RIEGDSTFSS AETLLALKSL GYTFDQYTGT ASKWVKNSRT
KTITQCIKAV NKWGDAGRLD RLIRLLADRQ KAEDPGKGSF ENSVYSDMWA YLALGEAGKL
DGLNTGDAKT YILSKQDTSG SWGEIFDQYY PDFLSTAQAI RSLSYLPEAG EADVQAAINK
GLNYLKTLQR DDGSVSAKDD DPAVDNSELI ITLNRLNIDP QGAEWTKTVD GKKFTPVSYL
MNNTMNADGS FGASKNVFGA TEALYAYLIQ DGTGNPGGDG PGGGSSENRC SVNIAIVGKD
DEIIYRPGSV ILDKTSKWGI TAMGALHATG LSYVGDSSFV KSIDGLANSG MNGWMYSVNG
VVPMTTASDK VVKEGDRVIW WYSTDMNSSG PSWDSLLKGS AGAGGNQSAA ASSTSLIEQN
KELPDALQVS EKALAALEQI ALLLNPQDIE KENTLDASVQ DDEINNVIVV GSRQPLNLAL
LKTLKKELDQ NEVQLTQKVE ADSGAVLLDA KEELALVIPA KSLNKDMEIN VKEAAAGNQQ
ETAAPSGFRQ VSAIYDFGPK DTVFTMPATL TFKLVMPPLV KPDRLVLAYY DKVAGKWVSV
PAVVDLDKGL VLTKLRHLGQ YAVFARESLK TFADVNETSS SWAKDYIENL AGAGIVDGID
ATHFEPSRKV TRAELTSLLV KALGISTDQS SAISLKDVQA DDWYAGAVGA AQAAGLITGY
EDGTFRPGNT VSREELAVIL VRAMKLESDQ EKMWFADIDK INSWARDSVF TASSKGLIKG
FPDGTFRPDV AAGRDECAVI IFRMLNEY