Gene Dtox_0555 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_0555 
Symbol 
ID8427490 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp569812 
End bp570765 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content45% 
IMG OID645032920 
Productperiplasmic binding protein 
Protein accessionYP_003190098 
Protein GI258513876 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAGC AATCCAAAAT TATTTCTGTT TTTCTAGTAA TCTTCATAAT TACCATACTG 
GCCGGATGCG CCCAAACCAA GCCCGCGTCA ACACCCGACA ATATTATGGT GGTAGACGAT
TTGGGTAAGG AAGTAAAGCT AAAAGAACCG GCGAAGAGAA TTATATCACT TTACACCGGG
CATACGGAAA ACCTTTATTC TCTGGGGCTA AATGATGAAA TTATTGGGGT TTCCGACAGC
GAGTCCTTCC CGCCCTCTGC TCTGAAAAAA CAGTCCTTCA GCTACCGGGA AGACGCTGAA
AAGCTCATTG CAGCCAAGCC GGACCTGGTG CTTATCAGAA CTTTTATTGC CAACAATTAT
CCGGATTTTG TAAATAAATT GGAAACCGCG GGTATTCCCG TTGCGGTCCT GTACCCGGAG
AATGTTGATC AATTTCTTCA GTACCTGAAA AAACTAGGCA AACTAACAGG AAAGGAAAAA
GAAGCCGGCG AACTGGTAGA TCAATTTAAC AGCCAATTAA AGAAAATTGG GGACGTGGTG
GCCAAAATAC CCCAGCAAGA GCGAAAGAAA GTGTTCTTTG AGACAACTAA GGACATAACA
ACCTGCACTC CGGACTCAAT CGCCGCTTTT ATTTTGGAAA AGGCCGGGGC CATTAATGTG
GCGATTGATG CTAAAGCGGT GAGACCGGGC AGCACCATTG CCTCATATGG TCAGGAAAGG
CTTCTGGCCA AAGCTAGGGA CATTGATGTA TACCTTGTGC AAAAAGGTGA AATGAACAAG
ACCAGAGAAG AAGAAATATA TCTGCGACCC GGTTACCAGG CCATCAAGGC AATACAAAAC
CACCAGGTTT TCTTGGTGCC AGAGGCACTG GTATCACGTC CCACCATGCG GTTATTGGAT
GGTATCGCAG AAATTGGGCG AGTTTTATAT CCGGATTACT TTAAGACTGT TTAA
 
Protein sequence
MNKQSKIISV FLVIFIITIL AGCAQTKPAS TPDNIMVVDD LGKEVKLKEP AKRIISLYTG 
HTENLYSLGL NDEIIGVSDS ESFPPSALKK QSFSYREDAE KLIAAKPDLV LIRTFIANNY
PDFVNKLETA GIPVAVLYPE NVDQFLQYLK KLGKLTGKEK EAGELVDQFN SQLKKIGDVV
AKIPQQERKK VFFETTKDIT TCTPDSIAAF ILEKAGAINV AIDAKAVRPG STIASYGQER
LLAKARDIDV YLVQKGEMNK TREEEIYLRP GYQAIKAIQN HQVFLVPEAL VSRPTMRLLD
GIAEIGRVLY PDYFKTV