| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_0547 |
|---|
| Symbol | |
|---|
| ID | 8427482 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum acetoxidans DSM 771 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013216 |
|---|
| Strand | - |
|---|
| Start bp | 563699 |
|---|
| End bp | 564778 |
|---|
| Gene Length | 1080 bp |
|---|
| Protein Length | 359 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 645032912 |
|---|
| Product | periplasmic binding protein |
|---|
| Protein accession | YP_003190090 |
|---|
| Protein GI | 258513868 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGACTTATT GTAGGAAGAT TTCTCGCATA ATATTATTAT TTTTATTATG CACAGTACTT
TTTCATAGTA ATTCTCAAGC ACTTGCCGGT GAGCCTGAAA AAAAAATAGT AAGAGATGTA
ACCGGGAAAA CAATACTGGT ACCTGAAATA CCCAAGCGCA TTATTTCACT GCAAGATGAC
GCTTCGGAAT TGATTTATGC TCTGGGTGCG GCGGATCAAC TCATTGGGGT TAATGAAAAC
TGTACCTCCC AATTTTTTTT GCAGGATAGG GAAAAGATAC CTGCAATAAC TGTCTCCAAT
ATCAGTAAGA TCACGGCATT AAAGGCTGAT TTAGTAATAG CTGATCCGGC AGCTGAAAAA
GATTCTTTAC AATTATTAAA AAAGAAAGGC ATACCTGTTT TTTTATTTGA TTGCAATAAA
ACTGAGGAAT TAAGTAAAAA CATAAAATTA CTGGGTATTG CGCTGGGCAA AGAAACAGCA
GCCGAGGAGT ATACCGATAT AAACGATAAA TATATTTCTC TGATTAAAAC CCGCACTAAG
AATTTATCGG CTAATGAAAG ACCCAGAGTA TACCTGGAAG CTGATAATGA TTATATTACT
CTCAATCTTA ATGATGATAA ATCTAAGCTG GTTCAGTTAG CCGGAGGCTT AAATATCGCT
TCTGAAAAAA GATTTAAAAC AATGTCATTT GTAGATAATA AATGGATCAT AGCAAAAAAT
CCCTCAATAA TTATTAAATA TGTTGATAAT GTGTCTAATA GCGGTTTCTC TGAAACCATG
CTAAAAAATA AAAAAGAGGG CATGCTTGCC AGAACCAACT GGAAAAATAT AGAGGCTGTA
AAAAATGATA AAATTTATTT GCTTACCTGT GATATTTGTC GTGGACCAAG ATATGCTATC
GGTCTTGCCT ATATGGCCAA ATGGCTGCAT CCCGAGCTTT TCTCAGATTT GGATCCGGAT
GCGTTTTATC AGGAAATAAA TCAAAATTTT TATGGCCAGC AACTGAATTT GGCATCTGTA
TATCCTTATA ATGAAATAGA AGTACAGGAG CAATCTCAAA TACCGGCAAA TGTAAAATAA
|
|---|
| Protein sequence | MTYCRKISRI ILLFLLCTVL FHSNSQALAG EPEKKIVRDV TGKTILVPEI PKRIISLQDD
ASELIYALGA ADQLIGVNEN CTSQFFLQDR EKIPAITVSN ISKITALKAD LVIADPAAEK
DSLQLLKKKG IPVFLFDCNK TEELSKNIKL LGIALGKETA AEEYTDINDK YISLIKTRTK
NLSANERPRV YLEADNDYIT LNLNDDKSKL VQLAGGLNIA SEKRFKTMSF VDNKWIIAKN
PSIIIKYVDN VSNSGFSETM LKNKKEGMLA RTNWKNIEAV KNDKIYLLTC DICRGPRYAI
GLAYMAKWLH PELFSDLDPD AFYQEINQNF YGQQLNLASV YPYNEIEVQE QSQIPANVK
|
|---|
| |