| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_0542 |
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| Symbol | |
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| ID | 8427477 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum acetoxidans DSM 771 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013216 |
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| Strand | + |
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| Start bp | 554810 |
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| End bp | 556423 |
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| Gene Length | 1614 bp |
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| Protein Length | 537 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 645032907 |
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| Product | extracellular solute-binding protein family 5 |
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| Protein accession | YP_003190085 |
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| Protein GI | 258513863 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02294] nickel ABC transporter, periplasmic nickel-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.578152 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAAAAA ACATTATAGC AACCATTACG CTATTAATTT GCACCTGCTT GATCATTTCT
GCTTGCGGCA AAAATGATTC AGTATCAAGC AAACCGGGAG TAAAGGAAGT TGTTGTTGCG
ATTTATCGTG ATGGGGCCAT GGGGGAATTG GATGCCGCAA CCTATAATGG ACCTCACTTT
TTGTACAAGA TGATTTATGA CGGTTTTGTT GAAGATGGAG GAGATGGAAA GATCCTTCCT
CAGCTTGCAA CAAGCTGGAT CATTTCACCG GATGGAAAAA CATACACGTT TAAGCTCCGT
AAAGGAGTGA AATTTTCTGA TGGAACCGAT TTCAACGCAG ACGCTGTTAT ATTCAACCTG
AAAAGATGGG TCAACAACAA ACGTCATGCG ATCTTGAAAT CGGTCAATGT AGAAAGTATG
GAAGACGTTG ATAATGACAC AGTAAAAATT GTTTTTAAGG ACGGTGCCTA TCCAATTTTG
ACGGAGCTGA CATACCCAAG GCCAGTACGA TTTTTAAGCC CTTCATCAGT TACTGCGGTT
GCCGGAGATG TTATGGGTAA ATTTACAAAG CCTGTCGGCA CAGGTCCATG GATGCTGGAA
TCCTATAAAA AAGATCAGGA ATTTACTCTT GTTCCTAATC CATACTACTG GGGTGAAAAA
CCTAAGCTGG ACAGAATAAC ATTTAAGGTA ATAACAGATG GACAAGCAAG AGTTTTAGCT
CTTCAAAGCG GTGAGGTTGA TATTCTCGGA GGTGATCTTG TCTCGAAGAT CCCCATGGAG
AGTTTTTTAG AGCTTAAAAA CTCGGGTAAG TTTACAACAT ACACAAAAGG AACAATGTGC
TCGCACTTTA TTTCCTTCAA TCAAAAGGTG GAAGCATTTC AGGATAGAAA TGTTCGTTTA
GCCATGAACT ATGCCATCAA TAAAAAAAGC ATTGTAACAG ATCTTTTTGA CAATATTGGT
TTTGAGGCGA ATGGCTTATA TCAAAAAGGC GTTCCTTACA CTACAGATGA AAATAATTAC
GGATTTGCAA ATGATAAAGA AAAAGCGAAA CAATTATTTG ATACTGCCGG ATATGTAGAT
ACAAACGGTG ACGGTATTCG TGATAAGAAC GGAAAGAATC TTGAGTTTAA TTTTGTATTA
TCAACAGAAG AATTTCCTGA ATGGAAGCCG CTGGCCGAGT TTGTGCAATC TGAATTTTCA
TCAGTTGGCA TAAAAGTAAA TCTTAATATT ATGGATAAAA ACGGATACGA GGACGCAACG
ATGAATACTA AGGCATTTGA CATCGCTCTT ATGAGAACAT CTTCGGATTC CTGGGTGCCG
CACGGTTCAA TGCTGGAGCT TTTCTCAATT CTTTCTACAA GCAATGCCGC AAAGGCCTGG
TATGATGAGG GACTCTATAA CAACATTATA AAAACATTGA ACAGCATTGA CGAAAGAGAA
AGACAAAAGA ATTACGATAA GGTATTCAAA TTCATCAGCG AAGAAGCTCT CACAATTCCT
ATTTACTATC CTATAACTTC ATTCGCTGTT AATTCTGATA AAATAAAAGG ATTTGAAATC
GGAGTTAATA GCTATGCACC GATAGAATGG CAGAAGCTTG ACGTAAAACA ATAA
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| Protein sequence | MRKNIIATIT LLICTCLIIS ACGKNDSVSS KPGVKEVVVA IYRDGAMGEL DAATYNGPHF
LYKMIYDGFV EDGGDGKILP QLATSWIISP DGKTYTFKLR KGVKFSDGTD FNADAVIFNL
KRWVNNKRHA ILKSVNVESM EDVDNDTVKI VFKDGAYPIL TELTYPRPVR FLSPSSVTAV
AGDVMGKFTK PVGTGPWMLE SYKKDQEFTL VPNPYYWGEK PKLDRITFKV ITDGQARVLA
LQSGEVDILG GDLVSKIPME SFLELKNSGK FTTYTKGTMC SHFISFNQKV EAFQDRNVRL
AMNYAINKKS IVTDLFDNIG FEANGLYQKG VPYTTDENNY GFANDKEKAK QLFDTAGYVD
TNGDGIRDKN GKNLEFNFVL STEEFPEWKP LAEFVQSEFS SVGIKVNLNI MDKNGYEDAT
MNTKAFDIAL MRTSSDSWVP HGSMLELFSI LSTSNAAKAW YDEGLYNNII KTLNSIDERE
RQKNYDKVFK FISEEALTIP IYYPITSFAV NSDKIKGFEI GVNSYAPIEW QKLDVKQ
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