| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_0449 |
|---|
| Symbol | |
|---|
| ID | 8427384 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum acetoxidans DSM 771 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013216 |
|---|
| Strand | - |
|---|
| Start bp | 465067 |
|---|
| End bp | 466017 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 645032825 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_003190003 |
|---|
| Protein GI | 258513781 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.143195 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGGCAAT TTCTTTTTAA GCGTTTAGCT GCTGCAATTT TAGTCGTTGC AGCAGCTTCC
ATGCTAACAT TCGGAATATT ACATCTGACG CCGGGAGATA CTCCTGTGAC TATCCTGAAG
CATGCTTTTA TAGGAATAGA ACAAGAGCCC ACAGATTCGG AAGTTACCAA TATCACGAAC
CGGTACAAGT TGGATGAACC ATTGGATAAG CAGTATTTTT CCTGGATAAA AGAAGCTGTC
AGAGGGAACC TTGGGGAATC CTATGTTTAC AGAACTTCCG TGGCTCAGAT CATTGGGTTG
AGATTTCCGG CAACAGTCCT GCTGGCTCTG GTGAGTGTTG CACTTTCACT GCTGATAGCA
ATTCCGGTTG GAGTTTTTTC TGCGGCAAGA AGGAATTCTG TGTTTGATCA CCTCAGCCGG
TTATGTGCTC TTTTCGCTGT GTCTATACCA AGTTTTTGGC TGGCGCTGTT ATTAATCATT
GTTTTTTCCC TTCAATTAGA CCTGTTTTCG GTAGCAGGAT TCAGGCAAAT ATCTGATGTG
GTGCTGCCAT GCGTAACAAT AGCAGCAGGT ATGTCGGCGG TTACTATGCG CATGATGCGT
TCATGCATGC TTGAGATATT GAACCAGGAT TATATTTTAA CAGCCAAAGC AAAAGGTCTG
CATGAAAGCG TGGTCGTATG GCGGCATGCG TTAAGGAACG CTTTTCTCCC GGTAATAACC
ATAGTTGGAC TTCAATTTGG ACATATGCTT GGAGGAACGG TAGTCGTGGA GACGGTGTTT
GCCTGGCCGG GGTTAGGAAA ACTGCTGATT GATTCAATAT TAGCTAAAGA TATCCCTATG
GTCCAGGGCA TTATAGTCTT AATCGCCACT TCCTACGCCG TAGTCAATTT GCTGGTAGAC
CTGGCTTACG TCCTGATGGA TCCCAGAATA CGCTATGGAA GGGAAGTCTA A
|
|---|
| Protein sequence | MWQFLFKRLA AAILVVAAAS MLTFGILHLT PGDTPVTILK HAFIGIEQEP TDSEVTNITN
RYKLDEPLDK QYFSWIKEAV RGNLGESYVY RTSVAQIIGL RFPATVLLAL VSVALSLLIA
IPVGVFSAAR RNSVFDHLSR LCALFAVSIP SFWLALLLII VFSLQLDLFS VAGFRQISDV
VLPCVTIAAG MSAVTMRMMR SCMLEILNQD YILTAKAKGL HESVVVWRHA LRNAFLPVIT
IVGLQFGHML GGTVVVETVF AWPGLGKLLI DSILAKDIPM VQGIIVLIAT SYAVVNLLVD
LAYVLMDPRI RYGREV
|
|---|
| |