| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_0443 |
|---|
| Symbol | |
|---|
| ID | 8427378 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum acetoxidans DSM 771 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013216 |
|---|
| Strand | - |
|---|
| Start bp | 458781 |
|---|
| End bp | 459584 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 645032819 |
|---|
| Product | putative ABC transporter permease protein |
|---|
| Protein accession | YP_003189997 |
|---|
| Protein GI | 258513775 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4587] ABC-type uncharacterized transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.060153 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAT ACATCGCGAT TATCCGAATA CGCTTTATAA ACAGTCTTCA ATATCGCGCA
GCAGCAATCG CGGGCATGGC AACGCAATTC GCCTGGGGAC TTATGGAAAT ACTCGCATTT
TCGGCATTCT ATAGAGCTAA TCCTGCCGCG TTTCCAATGG AGTTCTCCCA GACGGTTTCC
TACATATGGA TGCAGCAGGC ACTTCTGGCG CTGTTTATGG TTTGGTTTTT TGAAGGAGAG
ATATTCGCTT CCATTACAAG CGGAGGTATA GCCTATGAGC TTGCGCGGCC GGTGGACTTA
TACAGCCGCT GGTTCTGCCA GTCAATGGCA AACAGGCTGG CAAAGGCAGT ACTTCGATGC
TTCCCCATAC TCATCGTGGC ATTCATCGTA CCGGAACCGT TCAGAATGTC CTTGCCCGTA
AACGCCGGAC AATTTATACT GTTTTTGGTT TCAGCGTCAC TCAGCCTGTT TGTTGTGGTA
TCGTTCAGTA TGCTTATCTA TATATCAACA TTTTACACCT TGTCGCCTAT GGGTGTGAGG
CTGATCTCGG CTGTGCTGGC CGACTTTATG GCCGGAGCAA CAATTCCGCT ACCGTTTTTT
CCTCCGGCCT TTCTAACCGT GGCCGAGCTT ATGCCGTTTG CCGCCATGCA GAACATGCCG
CTGCGAATAT ACAGCGGGAA CATTGCGGGT ACGGACGCGG CACTGGGTAT TGGCTTGCAG
CTATTTTGGC TGTTAGTTCT TGTGCTGATC GGCAGGCTGC TGATGAAAAA CGCACTCAAA
AGAGTCGTTG TACAGGGAGG ATGA
|
|---|
| Protein sequence | MKKYIAIIRI RFINSLQYRA AAIAGMATQF AWGLMEILAF SAFYRANPAA FPMEFSQTVS
YIWMQQALLA LFMVWFFEGE IFASITSGGI AYELARPVDL YSRWFCQSMA NRLAKAVLRC
FPILIVAFIV PEPFRMSLPV NAGQFILFLV SASLSLFVVV SFSMLIYIST FYTLSPMGVR
LISAVLADFM AGATIPLPFF PPAFLTVAEL MPFAAMQNMP LRIYSGNIAG TDAALGIGLQ
LFWLLVLVLI GRLLMKNALK RVVVQGG
|
|---|
| |