Gene Dtox_0386 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_0386 
Symbol 
ID8427321 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp401450 
End bp402046 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content40% 
IMG OID645032776 
ProductAccessory gene regulator B 
Protein accessionYP_003189954 
Protein GI258513732 
COG category[K] Transcription
[O] Posttranslational modification, protein turnover, chaperones
[T] Signal transduction mechanisms 
COG ID[COG4512] Membrane protein putatively involved in post-translational modification of the autoinducing quorum-sensing peptide 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCATA CTTGGTCGGT ATGCTTGGCC CGGTATTTGG GCAGTGAGCT GAATCTGGAT 
AAAAGTAGGG TGTCTATAAT CTCATATGGT TTGGAAGTAT TAATCGGTGG GTTTTTCAAA
TTAATAATTT ATATTGTAGT ACCCTTATTC CTGGGGGTTT TTAACCAGTT TGCAGCCGCT
TTTCTCTGTT CCGCACTTCT AAGGCTGCCC TCGGGAGGCC CACACTGCTC AGCATATTAT
AAATGCCTGA TTAATACTCT GGTCATTTAT TTAACTATTG CTGTAACTGC CACGTATCTT
TCTTTATCCC CCCTGCCGGT ACAAGCAGTG CTGTGGTTTG GCCTGGGACT TGCATTTATG
GTTTTCTATA AACTGGCGCC GGTAGATGTA AAAGAAAAAC CCATCAAAAG TGAGAAGCGT
AGAAGATGTT TAAAAATTAT CTCCTGTATT ATAGTTGTTG TATATTTCAT TTTTTTTAGT
TACTGGAGGT TTTCTCAAGA TATAATGTGG GCCTGCAGTA TGGCGGTTAT ATTTCACACA
TTCACACTGA CCTGGTCCGG ACAAAGATTT ATTGGAAAAT TGGACAAGTT GTTATAA
 
Protein sequence
MIHTWSVCLA RYLGSELNLD KSRVSIISYG LEVLIGGFFK LIIYIVVPLF LGVFNQFAAA 
FLCSALLRLP SGGPHCSAYY KCLINTLVIY LTIAVTATYL SLSPLPVQAV LWFGLGLAFM
VFYKLAPVDV KEKPIKSEKR RRCLKIISCI IVVVYFIFFS YWRFSQDIMW ACSMAVIFHT
FTLTWSGQRF IGKLDKLL