| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_0365 |
|---|
| Symbol | |
|---|
| ID | 8427300 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum acetoxidans DSM 771 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013216 |
|---|
| Strand | + |
|---|
| Start bp | 380445 |
|---|
| End bp | 381998 |
|---|
| Gene Length | 1554 bp |
|---|
| Protein Length | 517 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 645032760 |
|---|
| Product | extracellular solute-binding protein family 5 |
|---|
| Protein accession | YP_003189938 |
|---|
| Protein GI | 258513716 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTTAGGAA AAAAAGTTAT GTGTGTCATA CTAAGTTGTA TTACTATGCT ATTTGTTTTA
GCCGGCTGTG GGCAGACTGA AAGTCAAAAA GTCAGTAAAA CCGGTTCTGC GAATCAGGAA
TTGGTGGTGG CTGTCTCCAG TGATGTAATG AATTGGGATT TGGAAAAGTT TCCCGACGGT
GATGCCAGGT TTGTCTGGTC TCAAATTTAT GAGACTTTAG TGCGTCTGAG CACTGATTTA
AAAGAACAGC CTGGTTTGGC TGTATCTTGG GAGCCTGCTG CAGGTGGTTC GGAATGGATA
TTTCACCTGC GAAAAAATGT GAAGTTCAGC GATGGGTCTC CGTTTAATGC TCAGGCTGTA
GTATATTCCT ACAGCCAGCG GGCGGACGTT ATGAAGCGCA AGTTGCTTCC GCTAAAAAGT
ATTGAAGTCA TTGATGATTA TACCGTTAAA TTTATTTGCA CAAAACCTAC TCCGTTACCG
TCATATTTGA CACATGTGGC CTGGCCTGTT ATGAGTCCCA GTAGTTTGGA TGATAAAGGA
ACTTTTAAAG GTCCGGTAGG AAGCGGTCCA TATAAGTTGG ATAAGCACGT AAAGGATCAG
GAAATTGTTA TGGTGCGCAA CGCAAATTAT TGGGGTACAC CTGGTACATT GGACAGGGTG
GTGTTCAAAG TTATACCTGA TGTCGCCACA CGGTTAATGG CACTGCAGTC AGGGCAGGTT
GATATGGCTC TTAAATTAAA TGAAATAGAT GCAAAACGCT TATCCGCTGA GCCGGGAGTG
AAAATTCACA AAAGGCTGTC AACTTTTACT GATTTTATGC AGTTCAATAC CATCAAAGGT
CCTTTTGAAG ATGTTAATGT TCGCCGTGCT GTTGCACTAT CTGTGAACAG TGAAAAAATC
GTTCAGGAAT TGCTCGGCGG TATTGGCGTA GCAGCTAAAG GCAGACCTCT CTCTCCGGTA
ATGCAGTACA GTAATTCTGA TCTGAAAATA GTTCCCGATC TTGAAAAAGC CAAGAAGTTA
TTGGCTGAAG CAGGCTGGAA AGACGGTAAC GGAGACGGGG TTGTTGAGAA AAACGGGAAA
CCCTTGCAGG TTAGTATGCT GCTGGCTCCC TGGAGTCCCA GGCAAAAAAT AGAAGCAGAG
GCAGTTCAGG GGCAATTGAA AGAGGCAGGG ATTGATTTGA AAATACAAAT CATGGAATCA
GGTGCCATTA CTGCAGCAGA AAAGGCCGGT AATTTTGATA TATTATTGCG TAGCGGTTAC
TATACTTGGG GCGATTACCC GCATCATTTG AGATTGCACA CTTCTAAAGA TTTGTCGAGT
CACTATAATA ATCAAGAATA TGACCAACTG GTAGCACAGG CTGAAGCGGA ACAGGATGAA
AACCTCAAGA AAGATTTGTA TAATAAGCTG CAGAAAATGA TTGTGGAACA AGTCCCGGCT
GTATACACTA TTCATGAGGA GAAAGTAGTA GCTACTCGTG ACTGGGTGAA AAATTATCAG
ATTACCGCTG AAGATCCTTG GCTTAACTTG GCCGGAATTA AGGTGGAAAA ATAG
|
|---|
| Protein sequence | MLGKKVMCVI LSCITMLFVL AGCGQTESQK VSKTGSANQE LVVAVSSDVM NWDLEKFPDG
DARFVWSQIY ETLVRLSTDL KEQPGLAVSW EPAAGGSEWI FHLRKNVKFS DGSPFNAQAV
VYSYSQRADV MKRKLLPLKS IEVIDDYTVK FICTKPTPLP SYLTHVAWPV MSPSSLDDKG
TFKGPVGSGP YKLDKHVKDQ EIVMVRNANY WGTPGTLDRV VFKVIPDVAT RLMALQSGQV
DMALKLNEID AKRLSAEPGV KIHKRLSTFT DFMQFNTIKG PFEDVNVRRA VALSVNSEKI
VQELLGGIGV AAKGRPLSPV MQYSNSDLKI VPDLEKAKKL LAEAGWKDGN GDGVVEKNGK
PLQVSMLLAP WSPRQKIEAE AVQGQLKEAG IDLKIQIMES GAITAAEKAG NFDILLRSGY
YTWGDYPHHL RLHTSKDLSS HYNNQEYDQL VAQAEAEQDE NLKKDLYNKL QKMIVEQVPA
VYTIHEEKVV ATRDWVKNYQ ITAEDPWLNL AGIKVEK
|
|---|
| |