Gene Dtox_0345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_0345 
Symbol 
ID8427280 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp357622 
End bp358485 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content46% 
IMG OID645032743 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003189921 
Protein GI258513699 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACATTA ACTACTGGCG GGAAGTAAAA CGGGACAATT TTGGCCGGAT AGGAATTATA 
ATATTTATTG TGCTGGTGCT GCTGGCTGTT CTGGCTCCTC TGCTGACCGG TTACCGGCCT
GGTACTTACA CCGGTTCTAT TTTTAAACCA CCGTCAGCGC AGTATTGGCT GGGAACCAAT
GATGTGGGGC AGGATATTTG GACTCATCTT CTTTATGGCA CGCGTACCTC ACTGACGGTT
GGCTGCGGGG TGGCCTTGCT GTCCGCTGTT TTCAGTCTGC TTATTGGTGG TACGGCTGCC
TTGTTCGGCG GTTATTATGA TCGTATTGTG ATGCGTTTGG TAGATGCGCT GATTGTAATA
CCTCCGGTTA TTATTGTAAT TCTGGCGGCA GCATATTTAA AACCAAACCT TTTTTTGTTA
ATATTATTAT TATCTTTGTT AATTTGGCCC GGCGGAGCCA GGATAATCAG AGCCCAGACG
CTGGTCTTAA AAGATAGAAT GCACGTAAAA GCAGCCCGCA CTTTCGGGGC CGGATGGCTG
CATTTATTGT CCCGTCATAT TGTCCCGGAT TTTGGACCGG TTTTGATTGC TGTTATGATC
CAGGACGCTC GCCGGGCTGT TTTTATGGAA GCGGGGCTTT CTTTTTTAGG TATTTCCGAT
CCGGCTATGC TTAGCTGGGG TATAATGATC CAGCATGCCT TAAAATTTAC TTATCTGAAT
GTCTGGCAGT GGTGGCTCTT GCCTCCCGGA TTTGCTCTTT CACTGACAAT AATGTCCTTA
ACTTTTATGG GTTTTGCTTT GGAAAAAATC TTGGATCCAC GGCTGCGCAA ACAAGAGGAG
GGTGAAAAGC ATGTTAAGCA TTAG
 
Protein sequence
MHINYWREVK RDNFGRIGII IFIVLVLLAV LAPLLTGYRP GTYTGSIFKP PSAQYWLGTN 
DVGQDIWTHL LYGTRTSLTV GCGVALLSAV FSLLIGGTAA LFGGYYDRIV MRLVDALIVI
PPVIIVILAA AYLKPNLFLL ILLLSLLIWP GGARIIRAQT LVLKDRMHVK AARTFGAGWL
HLLSRHIVPD FGPVLIAVMI QDARRAVFME AGLSFLGISD PAMLSWGIMI QHALKFTYLN
VWQWWLLPPG FALSLTIMSL TFMGFALEKI LDPRLRKQEE GEKHVKH