Gene Dtox_0322 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_0322 
Symbol 
ID8427257 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp332107 
End bp332847 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content41% 
IMG OID645032720 
ProductN-acetylmuramoyl-L-alanine amidase CwlD 
Protein accessionYP_003189898 
Protein GI258513676 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0860] N-acetylmuramoyl-L-alanine amidase 
TIGRFAM ID[TIGR02883] N-acetylmuramoyl-L-alanine amidase CwlD 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0112348 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCAAAA ATATAATCAG AGTGTTTAGG TTTAAGAGGA AAAATATTTT TCTGTTTACA 
GTAGGAATTG TATTAGCCGC AGTTATAATT AATTTATATA ATATATATGC TGAGAACAGG
TACATTGCTG CCTTGTCCTG GACAGTGGCC GGCAGAATAA TTGTTATTGA TCCGGGACAC
GGAGGTATTG ATCCTGGAGC AAAAGGGAAA AACGGAGGAG TGGAAAAAGA AATAACCTTG
GAAGTAAGCA AACGTTTGGC TGATTTATTT ACACAGGCGG GGGCAAAAGT GATTCTCACA
CGCCAAAATG ATACGGATTT AAGTGACCCG GGCAGTGGAA GTCTCCTGGC CCGGAAGAGG
CAGGATTTAA TCAGGCGGGT GGCTATGGCC AATGAAAGAA ATGCTGATTT ATTTTTGAGC
ATTCATGTCA ATAGTTTTGT TTCAGATCCG GGACAAAAAG GTGCTCAGAC TTTTACTCAA
CCTGGTTCTG TTGAGAGTAA GGAAATAAGT GAAGTGATTC AGGCTGAATT ATCCAGTTTT
TTGCATAACA GCAAAAGGAA AGCTAAAGAG GTGGATTATT TTACTACCAG AATAGCCAGA
GTTCCTGCAG TGATTGTTGA GATCGGTTTT GTCAGTAATC CTCAGGAAGA GTCAGCCATG
GTAAAACCGG ATTACCAGAG CAAGATAGCC TGGACAATAT ACAGTGGTGT AGTAAAATAT
TATGCACAAA AAGCATCCTG A
 
Protein sequence
MAKNIIRVFR FKRKNIFLFT VGIVLAAVII NLYNIYAENR YIAALSWTVA GRIIVIDPGH 
GGIDPGAKGK NGGVEKEITL EVSKRLADLF TQAGAKVILT RQNDTDLSDP GSGSLLARKR
QDLIRRVAMA NERNADLFLS IHVNSFVSDP GQKGAQTFTQ PGSVESKEIS EVIQAELSSF
LHNSKRKAKE VDYFTTRIAR VPAVIVEIGF VSNPQEESAM VKPDYQSKIA WTIYSGVVKY
YAQKAS