| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_0278 |
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| Symbol | rpoB |
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| ID | 8427213 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum acetoxidans DSM 771 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013216 |
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| Strand | + |
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| Start bp | 300462 |
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| End bp | 304145 |
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| Gene Length | 3684 bp |
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| Protein Length | 1227 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 645032676 |
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| Product | DNA-directed RNA polymerase subunit beta |
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| Protein accession | YP_003189854 |
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| Protein GI | 258513632 |
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| COG category | [K] Transcription |
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| COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
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| TIGRFAM ID | [TIGR02013] DNA-directed RNA polymerase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00054451 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.000191986 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCACTGGA TGGTCTATGC TGAAAAGCTG GGTACTAGAG AGCGGCTGAA TTTCGGTAAA
TTTAAAGAGG TACTTGATTT ACCCAACCTT ATTGAGGTGC AGAGAAATTC TTATAAGTGG
TTTCTTAAAA ACGGCTTGCG GGAAGTATTT CATGACATTT CTCCTATTCA GGATTTTACA
GGAAATTTAG TACTGGAATT TTTGGATTAT ACTTTGGGTG AACCCAAGTA TTTTGTGGAA
GAATGTAAAG AGCGTGATGT AACCTATGCT GCACCGCTGA GAGTTAAAGT GCGGTTAATA
AATAAAGAAA CCGGTGAAGT AAAAGAGCAG GAAGTCTTCA TGGGTGATTT CCCTTTGATG
ACAGAAAAGG GAACCTTTAT TATTAATGGT GCCGAGCGGG TAATTGTCAG CCAGTTGGTA
AGGTCGCCCG GTGTGTATTT CGCTGAACAA ATAGATCCCA GCGGAAAGAA ACTATTCTCC
GCTACAATAA TTCCTAACAG GGGTGCCTGG TTGGAGTTTG AAACAGATGT CAATGATCAT
GTTTTTGTGC GCATTGATCG CACCAGGAAA ATCCCGGCAA CAGTTTTGAT CCGCGCCCTT
GGCTACAGTT CTGATGCCAT GGTAATGGAA GAGTTCGGTG AGGATAAGAA TATCCAGGAA
ACCTTGAGCA GGGACAACAC CGGTTCCGAA GAGGATGCTT TGGTAGAAAT TTATAAAAGA
CTGCGGCCGG GTGAACCCCC TACTGTGGAA AGTGCTCGCA CCTTACTGGA AACCTTATTT
TTTGATCCGA AGCGCTATGA TTTAGCCAAT GTAGGGCGTT ATAAATTACA TAAAAAATTG
CAGCACGGAG TACTGTATCG TTACCCGGAA GAACAAAGCG GCAAGATAGA ATATGATGAG
ATTCTCAAAC AGGAATTGCC GGTTGAAAGA GAATTTATCC GTGAACTGAC GCCAAAGGAT
ATTCTGGATA CGATAAAATA CCTGCTGCGT TTAGTACAGG GTATTACAGA AGAAAAAGAC
CCTCTGGGTA GAAATATAGA GTATACGGTT GATGATATCG ATCACTTGGG CAACAGGCGC
TTGAGATCTG TTGGTGAACT GTTGCAGAAC CAGTTTCGTA TTGGTTTATC CAGGATGGAA
AGGGTTGTTC GTGAAAGAAT GACCATTCAA GATGTGGATG TGATTACACC ACAAGTTTTG
ATCAATATCC GGCCTGTGGT AGCATCCATA AAAGAGTTTT TTGGTTCCAG CCAGCTATCA
CAATTTATGG ATCAAACTAA CCCGCTGGCC GAATTAACAC ATAAGCGCCG TTTATCTGCT
CTGGGACCGG GTGGATTAAG CCGTGAGAGA GCCGGTTTTG AGGTGCGCGA CGTACACCAC
TCCCACTACG GGCGTATGTG TCCTATTGAA ACTCCTGAAG GTCCTAACAT TGGATTAATA
GGTTCTCTGA GCACATATGC GAGGATAAAC CAGTTTGGTT TTATTGAAAC ACCATACAGA
CGTGTAGATA AGGAAAAAAG AATTGTAACC AATGAGATAG AGTACCTGAC TGCCGATGTT
GAAGATAGGA ATATCATCGC TCAGGCTAAC GCGCCGCTGA ATAAAGAAGG CTTTTTTACA
GAGCAGGCGG TCAATGCCAG ACATGGCCAT GAGATTCTAA AAGTGCCGGG TGAAAAGATC
GACTTTATGG ACGTTTCTCC TAAGCAGGTG TTTAGTATTG CCACAGCTTT AATCCCGTTT
TTGGAGCACG ATGATGCCAA CCGTGCTTTG ATGGGAGCAA ACATGCAGCG CCAGGCGGTT
CCTCTTGTTA AGGCCCAGGC GCCTGTAGTC GGCACAGGTG TTGAATATAA AGCTGCCCGT
GACTCGGGTG TTGTGCCTTT GGCCAGGAAA AGCGGCATAG TCGAAAAGGT TACGGCTAAT
GATATTATGA TTAGGTCAGA TGACGGTACA TCTGATTATC ATAAATTATT AAAATTCACT
CGTTCCAACC AGGGCACTTG CATTAACCAG AGACCCATTG TAACTAAAGG CCAGAGAGTT
GACGAGGGAG ACATAATAGC AGACGGTCCG GCTACGGATA ATGGTGAGCT GGCGTTGGGC
CGCAACATTT TGGTGGCCTT TATGCCCTGG GATGGTTATA ACTATGAAGA TGCTATATTA
ATCAGTGAAA AAGCCGTTAA AGAGGACTTT TTTACCTCTA TCCATATAGA AGAGTATGAG
TGTGACGCCC GTGATACGAA GCTTGGTCCG GAAGAGATAA CTCGCGATAT TCCAAATGTA
GGAGAAGAAA TTTTAAAAGA TCTGGATGAC CGCGGGATTA TACGGGTGGG AGCCGAAGTG
CGTCCAGGCG ATATTATGGT TGGCAAAGTA ACGCCCAAAG GTGAAACAGA GTTAACCGCG
GAAGAAAGAC TCCTGCGTGC TATTTTTGGC GAAAAAGCCA GAGAAGTACG GGATACATCC
TTGCGTGTAC CGCACGGTGA AGCAGGTAAA ATTGTAGATG TTAAGGTGTT TTCCCGTGAT
AATGGGGACG AATTGCCTCC CGGCGTGAAT CACCTTGTAC GGGTTTATAT AGCCCAGAAA
AGGAAAATAT CAGTGGGAGA TAAGATGGCT GGGCGGCATG GCAACAAAGG GGTTGTAGCC
CGTATTATGC CGGAAGAGGA TATGCCGTTT TTGCCGGACG GTACCCCCAT AGAGATTGTA
TTGAATCCAC TGGGCGTGCC TTCCCGCATG AATATCGGGC AGGTGCTGGA AACACACCTC
GGTTGGGCAG CCCGGAAACT TGGTTGTTAT GTATCTACCC CAGTTTTTAA CGGTGCCACA
GAAAGTGATA TTTTAGAGTT TTTGAGAAAG GCCGATTTGC CTGATACAGC TAAAACGACG
CTGCATGACG GGAGAACAGG TGAACCTTTT GATAACCCGA TTACAGTTGG TTACGTATAT
ATGTTAAAAC TGCACCACCT GGTGGATGAT AAGATTCATG CCCGTTCTAC CGGCCCTTAT
TCACTGGTTA CCCAGCAGCC TCTTGGCGGT AAAGCTCAAT TTGGCGGTCA GAGATTTGGT
GAGATGGAAG TTTGGGCGTT GGAGGCTTAC GGTTCAGCTT ATACCTTACA GGAAATCTTA
ACGGTGAAGT CAGATGATGT TGTAGGACGA GTTAAAACCT ACGAGGCAAT TGTAAAAGGT
GAAAATGTAC CTGAGCCTGG TGTGCCGGAA TCTTTTAAGG TGCTGATAAA AGAGTTGCAG
AGCTTGGGGT TGGATGTAAA GGTGCTTTCC GAGGACGACA GGGAAATTGA AATTAAAGAG
ATCGAAGAAG ATATTGTGGA AACAGCCAAG GAATTAGGTA TTGATTTGCA GGATGGAGGT
TCCAAGTCTA CGCAAAAAGA AAGGATTGAT CCGCCTGGTT GCTCAATTGA GCGGGTCGAT
GATGATCTGG AGGATGAGTT GGAAGAAGAT GATGAGGAGT TTAACGAAGA CTTTTTGCTC
CAGGAGGTTA AGCTGGCTCA AGGTGGAAAA TTATCCGAGG ATATTATTGA TGAGCCGGCA
GATGAAGAGG ATTTTCTTGA TGCTGAAGAT GAGGATTTTG CCGATGATAT TGTCGGCGTA
AAATCTAAGC GGCTCTCCAA TACTGATGAA TGGGACGAAG ATTTAGATTA CCCGGACGAA
GATTATGACC TGGATGATGA ATAA
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| Protein sequence | MHWMVYAEKL GTRERLNFGK FKEVLDLPNL IEVQRNSYKW FLKNGLREVF HDISPIQDFT
GNLVLEFLDY TLGEPKYFVE ECKERDVTYA APLRVKVRLI NKETGEVKEQ EVFMGDFPLM
TEKGTFIING AERVIVSQLV RSPGVYFAEQ IDPSGKKLFS ATIIPNRGAW LEFETDVNDH
VFVRIDRTRK IPATVLIRAL GYSSDAMVME EFGEDKNIQE TLSRDNTGSE EDALVEIYKR
LRPGEPPTVE SARTLLETLF FDPKRYDLAN VGRYKLHKKL QHGVLYRYPE EQSGKIEYDE
ILKQELPVER EFIRELTPKD ILDTIKYLLR LVQGITEEKD PLGRNIEYTV DDIDHLGNRR
LRSVGELLQN QFRIGLSRME RVVRERMTIQ DVDVITPQVL INIRPVVASI KEFFGSSQLS
QFMDQTNPLA ELTHKRRLSA LGPGGLSRER AGFEVRDVHH SHYGRMCPIE TPEGPNIGLI
GSLSTYARIN QFGFIETPYR RVDKEKRIVT NEIEYLTADV EDRNIIAQAN APLNKEGFFT
EQAVNARHGH EILKVPGEKI DFMDVSPKQV FSIATALIPF LEHDDANRAL MGANMQRQAV
PLVKAQAPVV GTGVEYKAAR DSGVVPLARK SGIVEKVTAN DIMIRSDDGT SDYHKLLKFT
RSNQGTCINQ RPIVTKGQRV DEGDIIADGP ATDNGELALG RNILVAFMPW DGYNYEDAIL
ISEKAVKEDF FTSIHIEEYE CDARDTKLGP EEITRDIPNV GEEILKDLDD RGIIRVGAEV
RPGDIMVGKV TPKGETELTA EERLLRAIFG EKAREVRDTS LRVPHGEAGK IVDVKVFSRD
NGDELPPGVN HLVRVYIAQK RKISVGDKMA GRHGNKGVVA RIMPEEDMPF LPDGTPIEIV
LNPLGVPSRM NIGQVLETHL GWAARKLGCY VSTPVFNGAT ESDILEFLRK ADLPDTAKTT
LHDGRTGEPF DNPITVGYVY MLKLHHLVDD KIHARSTGPY SLVTQQPLGG KAQFGGQRFG
EMEVWALEAY GSAYTLQEIL TVKSDDVVGR VKTYEAIVKG ENVPEPGVPE SFKVLIKELQ
SLGLDVKVLS EDDREIEIKE IEEDIVETAK ELGIDLQDGG SKSTQKERID PPGCSIERVD
DDLEDELEED DEEFNEDFLL QEVKLAQGGK LSEDIIDEPA DEEDFLDAED EDFADDIVGV
KSKRLSNTDE WDEDLDYPDE DYDLDDE
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