| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_0275 |
|---|
| Symbol | rplA |
|---|
| ID | 8427210 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum acetoxidans DSM 771 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013216 |
|---|
| Strand | + |
|---|
| Start bp | 298212 |
|---|
| End bp | 298910 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 645032673 |
|---|
| Product | 50S ribosomal protein L1 |
|---|
| Protein accession | YP_003189851 |
|---|
| Protein GI | 258513629 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0081] Ribosomal protein L1 |
|---|
| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00000501108 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.000549627 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCCAAAAC ATGGGAAAAA GTATCAGGAT GCCACCAAAC AGGTAGAGCG GCACCGCCTT
TATGAAATGA CTGAAGCACT GGATCTGGTA AAAAAAGTTG CGCCGGCAAA GTTTGATGAG
ACAGTAGAAG TAGCCATTAG ACTGGGTGTT GATCCCAGAC ATGCTGATCA GCAAGTGCGT
GGTGCTGTTG TATTGCCCAA CGGTACAGGA AAAACCCGTA CAGTACTGGT ATTTGCCAAG
GCAGATAAGG TAAAAGAGGC TGAAGAGGCC GGAGCTGATT TTGTAGGTGC CGAAGACATG
GTTGAAAAGA TTCAGAAAGA AGGCTGGTTA GGTTTTGATG TGGCTATCGC TACTCCTGAT
ATGATGGGTC TGGTTGGCAA GCTGGGGAGA ATTTTAGGTC CCCGCGGCTT GATGCCGAAT
CCCAAGACAG GTACCGTTAC TTTTGATGTA GCCAATGCAG TTAAAGAAGT TAAAGCCGGT
AAGATTACCT ACCGTGTTGA TAAAGCAGGT ATTGTACATG CCCCTATAGG TAAGGTTTCT
TTTGATACCG CTAAAATTGT TGAGAATCTG CGTACTCTGG TTGATACCTT AATAAGGGTA
AAACCTGCGG CTGCAAAAGG ACAGTATATC AAGGGAGTTA CTGTTACATC GACCATGGGT
CCCGGTGTTA GCATAAATAC CCAGAAGATA ACTGGTTAA
|
|---|
| Protein sequence | MPKHGKKYQD ATKQVERHRL YEMTEALDLV KKVAPAKFDE TVEVAIRLGV DPRHADQQVR
GAVVLPNGTG KTRTVLVFAK ADKVKEAEEA GADFVGAEDM VEKIQKEGWL GFDVAIATPD
MMGLVGKLGR ILGPRGLMPN PKTGTVTFDV ANAVKEVKAG KITYRVDKAG IVHAPIGKVS
FDTAKIVENL RTLVDTLIRV KPAAAKGQYI KGVTVTSTMG PGVSINTQKI TG
|
|---|
| |