| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_0249 |
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| Symbol | |
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| ID | 8427173 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum acetoxidans DSM 771 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013216 |
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| Strand | + |
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| Start bp | 267210 |
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| End bp | 268322 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 645032636 |
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| Product | Shikimate/quinate 5-dehydrogenase |
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| Protein accession | YP_003189825 |
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| Protein GI | 258513603 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5322] Predicted dehydrogenase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00032725 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.391108 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGAAAT TTGCATTTGT AATACACCCT TTAGATATTA GAGACATTTA TAGAAAATAC
CCTTTTGCCA GGTACCTGCC TGATAAGTTG GTGGAGAAAG CAGTTACCTG TCTACCGGCT
ATGAAGGTAT CGCACATCAC CGGTGTAGCT TCCTCATATA ATAAAGCTGA AGGTTGGTTT
GTTACTTGTC CGCTCACAGC TAAGCAAATG GTTGAACTGC CGGAGGGGTA TGTCATTAAT
AGAATAATCG GTGCTGCCCG TGTGGCAGAA AAGCTGGGTG CCAAAATACT TGGTTTAGGC
GCGTTCACAT CAGTAGTTGG AGATGCGGGG ATTACAATAG CCCAAAACTC AAACATTGCG
GTGACTACCG GCAATAGTTA TACAGTAGCA TCAGCCATTC AAGGAGTTAA AAAAGCTGCT
GCTCTGATGG GTTATGATAT TTGTCAGGCT GATATTGTGA TTATCGGAGC AACCGGTTCA
ATCGGCAAGG TATGTGCCAG GTATTTGGCC AGAGAAGTAA AAAATTTGAC CCTGGTAGCT
CGTGACACAT CAAAATTAGA GGAAATTGCT GCTAAAATAT TGTTTGATTA TGGACTGGCG
GTAAAAGTAA CACCATATAG TCGCAGTGCT TTGCGGAAAG CAGATGTGAT TATAACTGTA
ACTAGTGCTG TAGATACTAT TATCGGCCCC GGCGACTTGA AGCCCGGTGC AGTTGTTTGC
GATGTTTCCC GCCCGCGAAA TGTCTCGAAA AAAGTAGCGG AAGAAAGAGA TGACGTACTG
GTCATAGAAG GTGGTATAGT GGAAGTCCCC CATGGGGTTA ATTTTAATTT TAATTTTGGC
TTTCCCGAAG GCACAGCGTA TGCTTGTATG GCTGAAACAA TGATTTTAGC CCTGGAGGGC
CGCTATGAAT CTTTTACTTT GGGAAGGGAT TTGACTCTGG AACAGATTGA GGAGATAGAG
AGACTGGCGA ATAAGCATGG GTTTAAGGTA GCCGGTTTCA GAAGTTTTGA GAAGGCGGTT
TCTTTGGAAG AAATTAAAGC AATTAAGCAA AAAGCCTTTA TAAAAAATTG CTCCCAGATC
AAAAAACCAC AGGTAGTGAG TAACCTTCCT TAA
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| Protein sequence | MEKFAFVIHP LDIRDIYRKY PFARYLPDKL VEKAVTCLPA MKVSHITGVA SSYNKAEGWF
VTCPLTAKQM VELPEGYVIN RIIGAARVAE KLGAKILGLG AFTSVVGDAG ITIAQNSNIA
VTTGNSYTVA SAIQGVKKAA ALMGYDICQA DIVIIGATGS IGKVCARYLA REVKNLTLVA
RDTSKLEEIA AKILFDYGLA VKVTPYSRSA LRKADVIITV TSAVDTIIGP GDLKPGAVVC
DVSRPRNVSK KVAEERDDVL VIEGGIVEVP HGVNFNFNFG FPEGTAYACM AETMILALEG
RYESFTLGRD LTLEQIEEIE RLANKHGFKV AGFRSFEKAV SLEEIKAIKQ KAFIKNCSQI
KKPQVVSNLP
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