Gene Dtox_0239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_0239 
Symbol 
ID8427163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp259066 
End bp259938 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content48% 
IMG OID645032626 
ProductNADP oxidoreductase coenzyme F420-dependent 
Protein accessionYP_003189815 
Protein GI258513593 
COG category[S] Function unknown 
COG ID[COG5495] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.223383 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.808086 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAAGC CTTCTATAGC TATTGTCGGA GCGGGAAAGG TAGGTACCGC GCTGGCTGTC 
TTGTTGAAAA GCAAGGGTTA CCCTGTGGTG GGTATTGCCA GCAGAACCAA TCAATCCGCT
AGATTGGCTG CGGCCAGGGT ATTAACTGAT GTAGCGGAAA AGCCTGAGGA TATTGCAAGT
AAAGCGGAGG TTGTTTTTAT AACCACACCG GATCGGGTTA TTGCCGAAGT AGACCGAGAG
ATCATGCAAA ACGGCGGCTA TAGGCCGGGA ACTATAGTGG TACATACCAG CGGCTCACAA
CCGGCTTCCA TATTGAAATC CGCCAGCGGG GCCGGAGCCT ATGTTGTCTC GATCCATCCT
TTGCAATCAT TTGCGGATGT ACAGGTGGCA ATACATAATA TTCCCGGTTC CTATATTGCT
CTGGACGGCG ACTCTGAGGC AATGCCCGTG GCTGAAATGA TTGTCAGCGA TCTGGAAGGC
AAAAAGTTTA TTATTGCAGC CAAAGATAAA CCTCTGTATC ATGCGGCGGC CTGTATCGCA
TCTAACTATC TGGTTTCTTT GCTTCACTTT TGTACAGGCC TTTATGAAAA ATTTGGTCTG
ACCAGGCAGC AAGCTTTAGA AGCATTATAC CCGCTGATTC AGGGCACGCT TAATAACACA
ACTCAGGTTG GCCCGGTCAG GGCTTTAACT GGTCCGATTT CCCGGGGGGA CACGCCTACA
GTGGAAAGCC ATCTGAAAGC TTTTACCGGG TGTAATGCAC TGGAAAACGA TTTATACCGC
AAGTTGGGGT TATATACGGT CAAGGTGGCT TTAGAAAAAG GTACTATTAA TGATGAACAA
GCTTTTGAAT TAAACCAACT GCTGGATATG TAG
 
Protein sequence
MQKPSIAIVG AGKVGTALAV LLKSKGYPVV GIASRTNQSA RLAAARVLTD VAEKPEDIAS 
KAEVVFITTP DRVIAEVDRE IMQNGGYRPG TIVVHTSGSQ PASILKSASG AGAYVVSIHP
LQSFADVQVA IHNIPGSYIA LDGDSEAMPV AEMIVSDLEG KKFIIAAKDK PLYHAAACIA
SNYLVSLLHF CTGLYEKFGL TRQQALEALY PLIQGTLNNT TQVGPVRALT GPISRGDTPT
VESHLKAFTG CNALENDLYR KLGLYTVKVA LEKGTINDEQ AFELNQLLDM