| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_0228 |
|---|
| Symbol | |
|---|
| ID | 8427152 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum acetoxidans DSM 771 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013216 |
|---|
| Strand | + |
|---|
| Start bp | 245882 |
|---|
| End bp | 247303 |
|---|
| Gene Length | 1422 bp |
|---|
| Protein Length | 473 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 645032615 |
|---|
| Product | tRNA(Ile)-lysidine synthetase |
|---|
| Protein accession | YP_003189804 |
|---|
| Protein GI | 258513582 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG0037] Predicted ATPase of the PP-loop superfamily implicated in cell cycle control |
|---|
| TIGRFAM ID | [TIGR02432] tRNA(Ile)-lysidine synthetase, N-terminal domain
[TIGR02433] tRNA(Ile)-lysidine synthetase, C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGACCGGTA CATTGAAACA AGTTCTTAAG TATATAAATA AACATCGGAT GGTTAACAAA
GGAGATAAAA TTCTGCTTGC TGTTTCAGGT GGCCCGGATT CGGTAGCCAT GTTGGATGTG
TTGTTTTGTC TCAGACATGA CTTGGGTATC TCATTGCACA TAGCTCATTT GAATCATATG
TTTCGTGGCG AGGAGTCTTT GGGTGATGCT GAGTTTGTCA GGGAACTGGC TGTGCGTTAT
AATTTGCCGG TTACTGTGCG ACATATAAAC GTCCCGTCCT TTATGGAGAA AACCGGCCTT
TCTTCACAAC CGGCAGCGCG AACGGTGCGG TATAGTTTTT TAGATGAAAC TGCCGCTCAG
GAATCCGCAT CCAGAATTGC ACTTGCTCAC CATGCTGATG ATCAGGCAGA AACAGTGATG
CTGCATTTTT TGAGGGGTAG CGGAGCTGCC GGGTTAAGGG GAATGCTTCC GGTGCGCGAT
AATTTTTATA TCAGGCCGAT GCTTTGTCTT AAAAGGCAGG ATATTGAGGA TTATTGCAAA
AAGAAAAACC TGCGCTGGCG CGTGGACAGC TCAAATCTTA AAACTGATTA TCGACGTAAT
AAAATTAGGA TGTATTTACT GCCGCTATTA GAAAAAGAAT ATAACAATAA CCTTACAGCC
ACACTAAATC GCTTGGCAGA TATCTTTCGG GAAGAAGAAG ATTATTTGGA ATTAATGACG
CGTAATGAGT ATAATAATTT AACTGTACTA AAAAGTGCAG GGGAGATTTG TTTGAATCTA
AAGGGGTTTC AGCAAGTTCC TTTAGCCTTG CAAAGGCGTA TTCTGCGCCT GGCCTGGCGA
GAAATCACCG GTGGCTTTCG GGACTTGGCT TTTGAGCAAC TTGGTAAGGC GGTTATTCTT
TTGACAAATC ATGTAGGCAG CGGCAGCCTG GAATTTCCTA GAGATGTTAA GGTGGTAAAA
AGATATGACA GCTTTTCATT TATAATTGGC AAGGATAAGC AGGATGGATT ATCCTATTAT
TATGACTTGC CGGTGCCCGG TAAAGTATAC CTTGCGGAAA TAAACAGAAC GCTGTTCTGC
GAGGTTGCAG ACACTCAGGC AATGGATGAA AAGTATGATA AGAGTTTTTT AAATCGCCGC
CGATTCTCAC AAGACGAAGC CTGGTTAGAC TATGAACGAG TAGCTTTTCC TCTCTGCGTA
CGGGGCAGAC AGCCCGGAGA TATTTTTGAA CCGCTTGGTT TGACCGGTTC GATGAAACTA
AAGAAATATT TTATTAACCA AAAGGTTCCC TGTGAGGTAA GGGATAAGGT TCCCCTGGTC
ATTGGAGAGG GCAAAATAAT TTGGGTCGGA GGGATGCAAA TTTCAGAAAG TGTCAAAATT
AATGAAGTAA CCACAAAATT TCTTCATCTG TTTTTGGTTT AA
|
|---|
| Protein sequence | MTGTLKQVLK YINKHRMVNK GDKILLAVSG GPDSVAMLDV LFCLRHDLGI SLHIAHLNHM
FRGEESLGDA EFVRELAVRY NLPVTVRHIN VPSFMEKTGL SSQPAARTVR YSFLDETAAQ
ESASRIALAH HADDQAETVM LHFLRGSGAA GLRGMLPVRD NFYIRPMLCL KRQDIEDYCK
KKNLRWRVDS SNLKTDYRRN KIRMYLLPLL EKEYNNNLTA TLNRLADIFR EEEDYLELMT
RNEYNNLTVL KSAGEICLNL KGFQQVPLAL QRRILRLAWR EITGGFRDLA FEQLGKAVIL
LTNHVGSGSL EFPRDVKVVK RYDSFSFIIG KDKQDGLSYY YDLPVPGKVY LAEINRTLFC
EVADTQAMDE KYDKSFLNRR RFSQDEAWLD YERVAFPLCV RGRQPGDIFE PLGLTGSMKL
KKYFINQKVP CEVRDKVPLV IGEGKIIWVG GMQISESVKI NEVTTKFLHL FLV
|
|---|
| |