Gene Dtox_0211 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_0211 
Symbol 
ID8427135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp228736 
End bp229887 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content40% 
IMG OID645032598 
ProductDEAD/DEAH box helicase domain protein 
Protein accessionYP_003189787 
Protein GI258513565 
COG category[J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG0513] Superfamily II DNA and RNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATAGGCACAA CATTTGAAAA ATTGGGTACA AATGCCCGGT TAGTGACAGG ACTGCAGAAA 
ATAAACATTA ATGTTCCTAC TGATATCCAA ACCAAAGTTA TCCCTCTGGC CCTGCAGGGA
AAAGATATCA TAGGCCAATC AGAAACCGGA ACAGGTAAGA CACTGGCCTA TCTGCTGCCT
TTGCTGCAAA AGCTGGATAA TACTAAACGT GAAACACAGG CTGTAATCTT GGCCCCCACA
CAGGAACTTT CTATTCAGAT ACAAAGGTTG ATTGAAGCAA TGATCAGCGG TTCGGACATA
CCGGTAACTT CTGCACCTAT TATAGGCAAT GTAAACATAG CACGCCAGGT AGAAAAGTTA
AAGGAAAAGC CGCATATCAT TGTAGGCTCA TGCAGTAGAA TATTAGACCT GGTTGAAAAA
AAGAAAATAG CAGCGCAAAA AATCAAAACA ATTGTTATAG ATGAAGCTGA CCGCTTGTTG
GATGATAAAA ATCTGGCTCA AATTAAAGCA TTAATTAAAA CCACCTTGAA GGATCGTCAA
ATCCTTTTGT TCTCAGCAAC CATACCTGGG AAAACACTGG AAAGAGCTAA AGAGATGCTG
CAAAATCCGC AAATAATAAC AATTCAAGCT AATTTAGAAA TTACACCAAA TATTTCACAT
ATATACTTTT TAACGGAATA CCGTGATAAA ATTAAAGTTT TACGAAAACT GGTTGGGATT
ATTAATGTTG AGCGAGCACT GGTTTTTGTC AATAGGGGGG ATAACATTGA ATTAACCTCT
GAAAAGCTCA ATTATCATGG TTTGAAAACT GCAGGCCTGC ATGCCGGTCT GCTGAAGGAG
GAGCGTAAAA AAGCTATTGA AGATTTTCGT CAAAATAAAA TACAGTTGCT GGTTGCTACT
GATATTGCGG CACGGGGTTT AGATATAGCC GGCTTATCTT ATGTCTTTAA TTTAGACATG
CCGGAAGATC CGCAAGCATA TTTGCACCGT GTAGGAAGAA CAGGACGGGC CGGAAAAACC
GGTACGGCCA TATCAATTGT TGCCCGGCAG GAAGCTGCTC TGATCAATAA GTATGAGAAG
GTTTTGAAAA TAAAATTCGC GGCCAAACAT ATGTACAAAG GAAAAATCTT AGATACAAGA
AGGTCGCCTT AA
 
Protein sequence
MGTTFEKLGT NARLVTGLQK ININVPTDIQ TKVIPLALQG KDIIGQSETG TGKTLAYLLP 
LLQKLDNTKR ETQAVILAPT QELSIQIQRL IEAMISGSDI PVTSAPIIGN VNIARQVEKL
KEKPHIIVGS CSRILDLVEK KKIAAQKIKT IVIDEADRLL DDKNLAQIKA LIKTTLKDRQ
ILLFSATIPG KTLERAKEML QNPQIITIQA NLEITPNISH IYFLTEYRDK IKVLRKLVGI
INVERALVFV NRGDNIELTS EKLNYHGLKT AGLHAGLLKE ERKKAIEDFR QNKIQLLVAT
DIAARGLDIA GLSYVFNLDM PEDPQAYLHR VGRTGRAGKT GTAISIVARQ EAALINKYEK
VLKIKFAAKH MYKGKILDTR RSP