Gene Dtox_0184 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_0184 
Symbol 
ID8427108 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp205662 
End bp207128 
Gene Length1467 bp 
Protein Length488 aa 
Translation table11 
GC content54% 
IMG OID645032573 
Productfumarate lyase 
Protein accessionYP_003189762 
Protein GI258513540 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1027] Aspartate ammonia-lyase 
TIGRFAM ID[TIGR00839] aspartate ammonia-lyase 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAATT ACCGAGTAGA AAAAGACTTG CTTGGTGAGC TTAAGCTGCC GCGAGCGGCT 
TATTACGGCA TTAACTCTTT AAGAGCCAGT CAAAACTTTG CTGTCAGCGG CTACGGAGTA
AATAAACACT TACTCCGTGC TCTGGCTGAA GTCAAGTTGG CCGCAGCACA GGCAAATCTT
CAGGCCAGCC TTTTGCCGGC AGAAACAGCC AGGGCCATCT GCTCAGCCGC ACAGGAAGTG
GCTGAGGGCG GGCTGGCTGA ACAGTTTATT GTGGATGCCC TGCAGGGAGG TGCCGGCACT
TCAACAAACA TGAATATGAA TGAGGTGCTG GCCAACCGGG CTATTGAACT TCTGGGCGGA
CAAAAAGGAG ATTATGATCT TGTTCACCCC TTAAACAAGG TTAACCTCTC CCAATCCACC
AACGATACTT ATCCCACGGC ACTGCGTATC GCAGCCATCC GGCTGGTGCT GGATTTAAGC
GAAGCTCTGG CCGAGCTGCA GACAAGCCTG CAGGAAAAAG AAGCGCAATT TGCCGGAATA
CTAAAACTCG GACGAACCGA ACTGCAGGAC GCCCTGCCCA TTACCCTGGG GCAGGAGTTC
GGGGCTTTTG CCGAGGCTAT AGCCCGTGAC AGGTGGCGGT TATACAAGGT CGAGGAACGG
CTGCGCCAAA TCAACTTGGG CGGTACGGCC ATCGGTACCG GTCTCAACGC CCCGCGCCGC
TATATCTACC AGGTAGTGGA GGAACTGCGT CAAATCACCG GGTTGGGATT GGCCCGTGCA
GAAAATATGG TTGACCTTAC CCAGAATGCT GACATATTCG CCGAGGTCTC CGGTCTGGTC
AAAGCTGCCG CCGTCAATCT ATGCAAAATT GCCGGGGATC TGATGCTGCT GGCTGCCGGC
CCTGCCGGAG GTTTGGCTGA AATCAATCTG CCCCCCCGCC AGGCTGGTTC TTCCATTATG
CCGGGAAAAG TTAACCCGGT TATCCTGGAA GCGGTTATCC AGGTGTCCTG GCAGGTCATG
GGGGCTGATC AGACAATTTG CCAGGCCTGC GCCGGAGGCC GGCTGGAATT AAATGCCTTT
TTACCCTTAA TAGCCCACAA CCTGCTGCAT GTTCTTGAGA TGCTGGCCAA AACAGCAAGA
GTTCTGAACA GCGAGTGCAT AAGAGGCATA ACTGCCAATG AAGAACGTTG CCGCAGGTGG
CTGGAAGAAA GCAATGTACT GGTTACCGCT CTGGTTCCCT ATATAGGTTA TGAACAGGCT
ACCTCCCTGG CACAGCAAGC CAGGGAAGAA AATAAAACCA TAGTAGAGTT GGTACAGGCC
CGCAATCTGC TAACTATAGA AGAGTGTCAG ATTATCGCCG CACCGCGCGA GTTGACCAGA
CCCGGTATAG CCGGTGCACG CCAGCTGGCC AATCGCTTTA AAAAGGCCAA CAGTCAAGGA
GATGGAAAAA ATGCACGAGA CACCTAG
 
Protein sequence
MTNYRVEKDL LGELKLPRAA YYGINSLRAS QNFAVSGYGV NKHLLRALAE VKLAAAQANL 
QASLLPAETA RAICSAAQEV AEGGLAEQFI VDALQGGAGT STNMNMNEVL ANRAIELLGG
QKGDYDLVHP LNKVNLSQST NDTYPTALRI AAIRLVLDLS EALAELQTSL QEKEAQFAGI
LKLGRTELQD ALPITLGQEF GAFAEAIARD RWRLYKVEER LRQINLGGTA IGTGLNAPRR
YIYQVVEELR QITGLGLARA ENMVDLTQNA DIFAEVSGLV KAAAVNLCKI AGDLMLLAAG
PAGGLAEINL PPRQAGSSIM PGKVNPVILE AVIQVSWQVM GADQTICQAC AGGRLELNAF
LPLIAHNLLH VLEMLAKTAR VLNSECIRGI TANEERCRRW LEESNVLVTA LVPYIGYEQA
TSLAQQAREE NKTIVELVQA RNLLTIEECQ IIAAPRELTR PGIAGARQLA NRFKKANSQG
DGKNARDT