Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtox_0160 |
Symbol | |
ID | 8427084 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum acetoxidans DSM 771 |
Kingdom | Bacteria |
Replicon accession | NC_013216 |
Strand | + |
Start bp | 176008 |
End bp | 183984 |
Gene Length | 7977 bp |
Protein Length | 2658 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 645032549 |
Product | YD repeat protein |
Protein accession | YP_003189738 |
Protein GI | 258513516 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3209] Rhs family protein |
TIGRFAM ID | [TIGR01643] YD repeat (two copies) |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTAGGGG GTCTAAGATT GGAGAAAAAA TATTATATGC CAAAACCTTC TTCAAGGATT AAGAAATGCA TCTGTTGTGT CTTAACAATA ATAATGCTGC TAATTTCAAA TACCGGTTTT ATTCCGAATT ACTATATCAC AAATAATGCA AAAGCTATGA GCCTACCGAA TAACTCACAG ACATCAATTG CCTCAGGGAA CTCCGGCAAC GAATCTCCAA GTGACAATAT GACCAATCAG TCAGAAACGG AGACTTCCGC ACAAAATAAT AGTGTCACCG GAGATGTTTA TGTTGAGCAA AAAATATTCA CAAGCGACTC ATTGATGTTT ACACCCTTTA ATTCTCAAAA AGCTCTGACT GAAAGAGTCT ACTCGGATAA TCCTGATTAC ATCAATAAGG TGATAAACTA TTCCGAAATC CCGAACACAT TTCAATCAAC CGGCGAGTAT GTTTACCAGT CAGGCGACAT CCATATGCAG CAGGTCATTC ACATGCCAAA GATGATGGAA AGGCCTGATA TCTCTAATCC CAGCGTAAGT AATACTGTTT ATAATCAAAC TTCAACATTA AACCAGAACA ATGAAAATAG CATTGCCAGC TATGTTTATG AAAATAACAA TAGTTCTGAT ATTATTGCTT CAGATACTGA AAGCACCTAC AATTCATCCG CCGCACCGGC AAGTGATTTC GATACTTCAG CAATCACCGA TTCAAAAACT GGTATGGAAG AAAACGATCT ATATTTGATA GATTCCGGGC AGATTATGAA CCCAGACCAG AGTGATTCCG GCGTTGTTGA CAGCCCGGCC CAGGAAAATT TCACCTCCCA ACAAACGGAT TTAAGTAACA CAAGCGTTGC CTCTGATGTA CACTCAACAG GCAGGAACAT GAACACAATC TTTCCCATCC AAAACAAATC CGGTCCTTTT ACTGTTGGCT TTTCCCGCCA TGCCGGCAGC GACCTGCTGC GGTTCTCTTA CAAAAACGCC AATTTGATGC TGAATCCATT GAACCCTGCC TCCGTATCCG GCAGTGTCTA CAAAAACACC ATTACATACG AAAACATATA TCCTAATACA AACATCAGAT ACACATTAGA GAAAAACCGG CTTAAAGAGG ATATAATTGT CCAAAAGTAT ACCGGTGTTA ATGAATTCAA TTTTCAACTA AGCGTAAGTA ATGCCGTTTA TGACAATAAG TCCAGTGGAG AAATTAGTTT TTTAGATCCC GGCTCATCTA CACCCCTTTT TTACATGGCC AAGCCATTTG CTGTTGATAA GAACGGAAAT CGGTGTGAAT TAGTTAACAT CGTGATAAGC GATACTGGCT CACTAAAACT TACGGTTGAT CCCGACTGGT TAAAGAAAGC CGTTTACCCT ATAATTATTG ATCCTACTAT TTATTTGCCT GACGCAATAT TTACCCGTTC GTCAACTGCT TACAACCTGG AAGGTGTTCA GGTTCAGGCA AACCAGCCAC GTTATGAGGC AAGCAAATTT GGACAGGCAA TAATGATTGA GGAAGGAACA ACGAACCTTT TTGATCAAAG TCAATTATCC ACATTTTATA GTTTTCCATC AAACACACAT GCAATCCAGC AAAGCAATGG TTTTTGGCGA TTATCAAAAG GAACTGATAA TGAATTTCTC TGCAACTATA ACATCAGTAT TGTTAATGGA ACTACTTATA CAGAAAGCTT TTACTTTCAC CATGATGGAA CAATAACAGG GCTATATATT ACTTTTTTCA CTAACAATGG ACATCACTTA GTGCCTGCGA CAATAGAAGA TTTAGGCGGT GGTCTAAAAC GTGCTAGCGC TACCTACACG ACAGTGATGA ATGATAATTG TATTCGTGCT GTCGATATCT TTCAACCTTC CGGCACATGG ACATATATTG AAATTGCTCG GGCACAATTA GAGGCAAAAG CTTATGCTAC TTCATATCAA ATTAATGGGG CTTCTCGAGC CGCTGAAGAT TTGAATATTC CCACAGTGGG AATATTAAAT AAAGATAAAG GCGCAATTGA GATACGTTTT AATCCTTTAA CAATTAATAA TTGGAACAAC TATTTTTATA TGGATATAAA TACCGGACGG TTTCTATTGT TTTTTGACAA TACAGGAAGA ATTTCATGGG ATTATGGTGC CGTCAATGAC AGTATCTCCT CAGTCGCCGG TATAGCGGTT GCTCATCAGC CAATTGATAT TTGTATGTCA TGGGATGCAA CTGTTGGTAC CAGAGAATTA ATGGTTAATG GCCAATCAAT CGGTACGAAA GCTTTTACAG CACCAGCTGG TTTACCTGAT TCCGTAGGTT TAGTTAATAA TTTTGCCACT TTGCTTGATG ATCTCCGCAT CTCCTCTCGG GCCCGCACTT TAGCTGAGCA TCAGGCTGCC TATAATAGTG GTCAGCCACT ACCCATTGAT GGCTTCACGA AATGTAAGAT GAGCTTCGAT GGTAATCTGT ATACGGCATC TTATGGTGTG ATAAATACAG GAATCACTGC GGCATTTTCT CGTTCATCAA TTGCATATAA ACAAAACGGC ACACAAGTTC AGGTAAACCA GCCGCGTTAT GAGGCAAGCA AATTTGGACA GGCAATAATG ATTGAGGAAG GAACAACGAA CCTTTTTGAT CAAAGTCAAT TATCCACATT TTATAGTTTT CCATCAAACA CACATGCAAT CCAGCAAAGC AATGGTTTTT GGCGATTATC AAAAGGAACT GATAATGAAT TTCTCTGCAA CTATAACATC AGTATTGTTA ATGGAACTAC TTATACAGAA AGCTTTTACT TTCACCATGA TGGAACAATA ACAGGACTAT ATATTACTTT TTACACTAAC AATGGACATC ACTTAGTACC TGCGACAATA GAAGATTTAG GCGGTGGTCT AAAACGTGCT AACGCTACCT ACACGACAGT GATGAATGAT AATTGTATTC GCGCTGTCGA TATCTTTCAA CCTTCCGGCA CATGGACATA TATTGAAATT GCTCGGGCAC AATTAGAGGC AAAAGCTTAT GCTACTTCAT ATCAAATTAA TGGGGTTTCT CGCGCCGCTG AAGATTTGAA TATTCCCACA GTGGGAATAT TCAACAAAGA TAAAGGCACA ATTGAGATAC GTTTTAATCC TTTAACAATT AATAATTGGA ACAACTATTT TTATATGGAT ATAAGTACCG GACGGTTTCT ATTGTTTTTT GACAATACAG GAAGAGTTTT ATGGGATTAT GGTGCCGTCA ATGACAGTAT CTCCTCAGTC GCCGGTATAG CGGTTGCTCA TCAGCCAATT GATATTTGTA TGTCATGGGA TGCAACTGTC GGTACCAGAG AATTAATGGT TAATGGCCAA TCAATCGGTA CAAAAGCTTT TACAGCACCA GTTGGTTTAC CTGATTCCGT AGGTTTAGTT AATAATTTTG CCACTTTGCT TGATGATCTC CGCATCTCCT CTCGGGCCCG TACCTTAACC GAATATCAAG CAGCCTACAG CAGCAACCAG CCGTTACCCA TTGATGACGC CACAACATGT AAGATGAGTT TCGACAATAA CTTATATACC ACCGATATGT GGGGAACCGG CATTCTGCCC TATTGGAACT ACAACACAGC AAGCCTGGGC GGAGGGTGGA ACACCCCAGT AAACACCTTC AACCTGAACA TGCTCTTAAA CAAATCCCTT TTCTATCTCC CAGGTCATGG TTTACCCATC GGAGAAAGCA TCACCTACAA TTCCATTGAC GGCAGAAACG GCCCCCTGGG CATTGGCTGG CATCTTGGTT CCGACACCGG CCTAACCGAG TGTAAAGACG GAAGCGTCAT TTATAACGGA GGCGACGGCT CATCCCATGC CTTTACACCA AACGGAAGCG GCGGATATAC CGCGCCTTCC GGTATCTATC TTACTCTGCA AAAAACAGCT CCGGGAAACT TCATAATCAA CGACAAAAAA CATAACACAT ACACCTACCA AAACAATAAA CCGACTCAAA GCATTGACCG GAACAACAAC ATAACAACCT ATACTTATGA TAACAACGGG CGGCTTTCAC AGCTTTACGA CGCTTCCGGC CGTAAAATCA CATACGCTTA TAACTCCGCC GGCCAGGTGA CATCTATAAG TGACCCGGCA AACCATGCAT ACAGATTTAC CTACCAAAAC AACAAATTAA TCTCAGCAAC CGATCCATCA AATAATACAT TTACCCTCAG CTACGATTCA AACGGGCATC TGAATTCCTT TACCGATCCG TTAAACCGTA AAACCACTTT CAACATAAAC CCAAACGGCC AGTTGCTGAG CTATAACGAC GCACGTTCCA ACGACCAGGA CTTCTATACA ACAACCTTTA ACCAATTCCT CCAAAGCAAT ACAATGGTCA CCACTATCAC CGACCCAGGC AACAGGACAA ACACCTACCA TCATGACAAT AATACCGGCA ACCTTATCAA ACAGCAGGAC GGAGTCGGCA ACACCTGGAA CTATACCTGG ACTGACAACA ACCTTACCCA GTCTCAAGAC GCTAAAGGCA CAACAAACTG CCAATATGAC AACATGGGCA ATATGACCCA AAAAACAATT ACCGTGGACA GCAACCCCGG CAACAACATC ATCGAAACCA TGACCTACAA CAACTACAAC GAGCTTCTAA CAAAAAAAGA CAACAACGGC AGAGAAACTA ATTACACATA CAACAGCCAG GGAAACCTGC TCTCCACATC CGATCCCAAC GAAAAGGCAT CAAGCAGCTA TAGTTACGAC CAATATGGCA ACATCATCCA ATACAACCCT AACGTGCTGG GATACCACAA TCTAGTCCTA AACGGCAGTA TGGAGATGCT CGACACCAAT GATAACCTGC CAGCCAATTG GGGCATGAAC GGGAGCGCCA CTGTGAGCCG GGATGATTCT TTCCACCCAC ATGGCAACTA CTCGCTCAAA ATCAGCAATA CCACTGCACC ATACTGTTAT TTTAGACAGG ATATAAATAA CACTAACTTT AGCTTAGACG CATTAACACT GAGAGCAGAG GTTAAACTTA ACAAAGTCAC AGGCGGTATT AGTTCTGATG GTGAAGAACC ATTTGGAGAA GATAGCTGCA GCGGCTTAAA AATTGGTTTT CTCTTCCATG ACGATTACGG CAACTACGCA TATGTATACG CTATATGTAC CGGTTCCGGG AGAACCACGA TTACCCTGCC GACCACAGTA CCGTTTCTCC CTAGCCCACC TTACCATGGC GCTTTATATC ATGTGCAGGT CTTCATGGGA TTGAACAATT CAAGCGGTAC CGCCTGGTTT GACGGAGTGC AGCTCCTGTG CAAGGGCAGC TGCAGTCAAG ATCATATCAT CAGTCAATTC AACTCCGTGG AAAACAGCAG TTTTGAAGAC ACCTTGGACT ACTGGACTCC CGGAGGTGCC GCTACTGTTA ACAGCAGCCT TTCCTGGGGA GGTTCCTACT CATTAAAAAT GACCGCGGCG GGAACCACCT ACCAGGACGT TCCCACCTAC GCAGGGGAGC CGCTGACCTT ATCCGGCATG ATTAATACCA GCGGTGTCAG CGGCAGTGGT GCCTGCTATC GGATCGACTA CTATGACGCC TCGAACAACC TGATCTCCGG GACTTCCGTA CAAACCGCCT GTATCAGCGG AACTCAGGGC TGGACAAGAA TGGCAAGTAT GGCCAACGCT CCTGCAAATG CCAACCACGC CCGGCTCCAA TGCATACTAA ACGGTAGCGG TGCAGCCTAT TTCGACGACG TGAAATTGAC ACCTATAAAC AGCATGCAAT ATACTTACGA TAAGCCCAGC GACTATACCA ATCCCGGCAG CTATACCGGA GGAAACTACA TGACCCTCTC GGAAGATGCC CTGGGTATTC AAAATGCTTA CGCATACGAT GCAAACGTCG GCAACATGAT AGGACACGCC GATCCTCTAA ATCATATTAC CTGGTTTAAC TATGACACAC TGAACCGTCT CATCAGAGTA ACAGATCCTT TAAATCGCAA AGCCTATTAC CAGTACGATC CCGTAAGCAA CCTGATTTAT ACACGCGACC CCAGGAGCGC GTCGTCATCG GACAACACAT ACAGCACATT CTACGGGCCA AACAACCTGA ACCGGCTTTC TGCCCTGACC GATTCACAGA ACCGGAGCGC CACCTATACC TATGACAGAT CCGGTAACCT GACGGGAATT GCCCTGCCCA ACGGCCAAAG CGAAAGCCTG GAATATGATA ACGCCAACCG CCTGAGCAAA ATTACACTAA GTGATGGCAA ATACTATAAC TATTACTATG ACGGAGCCGG AGAACTGATC AGCGTTACAG ATCAAAACGG AGCCGGTTGC TCCTGGAACT ACGACGGAGC ACACAGAGTA ACCGGTACAA CAGATCCATT AGGCTATCAG CTTAACTACT CCTTAGATAA AAGCGGCAAT CTTGAGTTGG AATCTGGTAT TGATTACAGT TGCCACTACA AGTATGACGG TGGCAATAAT ATATACAAAC TATATCTACC CGGTGCAATA ATCTACTATA ATCGCGATGG TCAAGGGCGT GTTTTTAACG TTGAGTATAA CCCGTCCTAC ATTGTTAATC ACCAGTTGCA TTATGCTACC AGCCAAAGAA TAATCAACTA TCTGGTCAAT GGCTGGTGCA TCAGTATCCA GGATCAATAC TTCCCCTATC GATCCGGTTA CTCATACGGT TACTATGCTG ACGGTACTAT CTCCGGCTAC AGCTCGTGGA ACGGCACACA CAGTTTCAGC TATGATGCTG ACGGAAGGCT TGCCTCCTGG ACACACGGAG GAATTCAACA GAATTACACA TATGATGCCG CCGGCAACCT CCTGACCAAA GGAAACAGGA CATTTGCCTA CAACAACATC AACGAGATCA CGAGTCCGGG CTTCACCTAC GATCAAAACG GTAACATGAC CGGCGACGGC AGCTTCAATT ATACCTACAA CGCCTTGAAT CAGCTCGTCC GGGTCAATAA AGCATCCGAC GGGAGTCTGG TGGCCACCTA TACCTACAAC CACGACGGCA CCAGGAGAAA TAAAGTCACC GCTCAAGGAA CAACCAACTA TAACTGGGAT GCCTCCGGGA ACTTAATTAG GGAAATCGGC CCCAATGGTA CCTATTGTTA CTACTATGTG TCGGGCAAAC TAATCGCCTT CGAGAATAAC CAGCAGTTGT ATATAGTGCA CGATAACCTG CGGGGCGATG TCATCAGCTT ATCAATGACG GATGACTACG GAAACACAGA TCAGGAAAAC AGGTATGACT ACGACCCATG GGGCACTCCT ATCTGTGAGG ATGAATCGGT AAAGTCACCC TTCCGCTACG CCGGTTATTA CTATGATACT GAGACGGGAT TGTATTATTT AAAGAGCAGG TATTACAGCC CGGCGTTGGG GAGGTTTTTG ACGAGGGACC CGCATAGTTT TATAAATCAT GCTGACCCAC AGACGCTTAA TTTATATGCT TATTGTGGGA ATAATCCTGT GAGCACTGTT GACCCAACGG GTCATTGGGA TGAAGAACCC AGTGAAGGAT ATGTTGTTAG CCCAGATTAT TTGGAAAATA CCGCAACAGC TAGGATTATT AATAGTAACG TATTCCAGAA TATATTAATG GGAATTAGTG TAGGTGAGGG ATTAAGAGCT CTTAAGTTTT TTAAGGGCGC GGGTAATTTG AAACTTACTT CTGATGCTCT TAAAAAAATT GGGACAAAGG CTGAGAGTAG TGGAATTAGG GCTGTCAAAG GAACTGCTGA TGATGCTTGG GATTTCTTTA GGAATCAGGT AAATATATCA TCAATAAAAG AAGTGAAACC AGGTGTTTTT GTTGGGAAAG ACGGTAATGG GCTGACCTTC ACATATAGAG CAGCCTCAAA GTCAGGACCA CCAACAATAG ATGTTAACGG AATCCAAGGC TTAAGGAAAA TAAAGTTCTT GCCATAG
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Protein sequence | MLGGLRLEKK YYMPKPSSRI KKCICCVLTI IMLLISNTGF IPNYYITNNA KAMSLPNNSQ TSIASGNSGN ESPSDNMTNQ SETETSAQNN SVTGDVYVEQ KIFTSDSLMF TPFNSQKALT ERVYSDNPDY INKVINYSEI PNTFQSTGEY VYQSGDIHMQ QVIHMPKMME RPDISNPSVS NTVYNQTSTL NQNNENSIAS YVYENNNSSD IIASDTESTY NSSAAPASDF DTSAITDSKT GMEENDLYLI DSGQIMNPDQ SDSGVVDSPA QENFTSQQTD LSNTSVASDV HSTGRNMNTI FPIQNKSGPF TVGFSRHAGS DLLRFSYKNA NLMLNPLNPA SVSGSVYKNT ITYENIYPNT NIRYTLEKNR LKEDIIVQKY TGVNEFNFQL SVSNAVYDNK SSGEISFLDP GSSTPLFYMA KPFAVDKNGN RCELVNIVIS DTGSLKLTVD PDWLKKAVYP IIIDPTIYLP DAIFTRSSTA YNLEGVQVQA NQPRYEASKF GQAIMIEEGT TNLFDQSQLS TFYSFPSNTH AIQQSNGFWR LSKGTDNEFL CNYNISIVNG TTYTESFYFH HDGTITGLYI TFFTNNGHHL VPATIEDLGG GLKRASATYT TVMNDNCIRA VDIFQPSGTW TYIEIARAQL EAKAYATSYQ INGASRAAED LNIPTVGILN KDKGAIEIRF NPLTINNWNN YFYMDINTGR FLLFFDNTGR ISWDYGAVND SISSVAGIAV AHQPIDICMS WDATVGTREL MVNGQSIGTK AFTAPAGLPD SVGLVNNFAT LLDDLRISSR ARTLAEHQAA YNSGQPLPID GFTKCKMSFD GNLYTASYGV INTGITAAFS RSSIAYKQNG TQVQVNQPRY EASKFGQAIM IEEGTTNLFD QSQLSTFYSF PSNTHAIQQS NGFWRLSKGT DNEFLCNYNI SIVNGTTYTE SFYFHHDGTI TGLYITFYTN NGHHLVPATI EDLGGGLKRA NATYTTVMND NCIRAVDIFQ PSGTWTYIEI ARAQLEAKAY ATSYQINGVS RAAEDLNIPT VGIFNKDKGT IEIRFNPLTI NNWNNYFYMD ISTGRFLLFF DNTGRVLWDY GAVNDSISSV AGIAVAHQPI DICMSWDATV GTRELMVNGQ SIGTKAFTAP VGLPDSVGLV NNFATLLDDL RISSRARTLT EYQAAYSSNQ PLPIDDATTC KMSFDNNLYT TDMWGTGILP YWNYNTASLG GGWNTPVNTF NLNMLLNKSL FYLPGHGLPI GESITYNSID GRNGPLGIGW HLGSDTGLTE CKDGSVIYNG GDGSSHAFTP NGSGGYTAPS GIYLTLQKTA PGNFIINDKK HNTYTYQNNK PTQSIDRNNN ITTYTYDNNG RLSQLYDASG RKITYAYNSA GQVTSISDPA NHAYRFTYQN NKLISATDPS NNTFTLSYDS NGHLNSFTDP LNRKTTFNIN PNGQLLSYND ARSNDQDFYT TTFNQFLQSN TMVTTITDPG NRTNTYHHDN NTGNLIKQQD GVGNTWNYTW TDNNLTQSQD AKGTTNCQYD NMGNMTQKTI TVDSNPGNNI IETMTYNNYN ELLTKKDNNG RETNYTYNSQ GNLLSTSDPN EKASSSYSYD QYGNIIQYNP NVLGYHNLVL NGSMEMLDTN DNLPANWGMN GSATVSRDDS FHPHGNYSLK ISNTTAPYCY FRQDINNTNF SLDALTLRAE VKLNKVTGGI SSDGEEPFGE DSCSGLKIGF LFHDDYGNYA YVYAICTGSG RTTITLPTTV PFLPSPPYHG ALYHVQVFMG LNNSSGTAWF DGVQLLCKGS CSQDHIISQF NSVENSSFED TLDYWTPGGA ATVNSSLSWG GSYSLKMTAA GTTYQDVPTY AGEPLTLSGM INTSGVSGSG ACYRIDYYDA SNNLISGTSV QTACISGTQG WTRMASMANA PANANHARLQ CILNGSGAAY FDDVKLTPIN SMQYTYDKPS DYTNPGSYTG GNYMTLSEDA LGIQNAYAYD ANVGNMIGHA DPLNHITWFN YDTLNRLIRV TDPLNRKAYY QYDPVSNLIY TRDPRSASSS DNTYSTFYGP NNLNRLSALT DSQNRSATYT YDRSGNLTGI ALPNGQSESL EYDNANRLSK ITLSDGKYYN YYYDGAGELI SVTDQNGAGC SWNYDGAHRV TGTTDPLGYQ LNYSLDKSGN LELESGIDYS CHYKYDGGNN IYKLYLPGAI IYYNRDGQGR VFNVEYNPSY IVNHQLHYAT SQRIINYLVN GWCISIQDQY FPYRSGYSYG YYADGTISGY SSWNGTHSFS YDADGRLASW THGGIQQNYT YDAAGNLLTK GNRTFAYNNI NEITSPGFTY DQNGNMTGDG SFNYTYNALN QLVRVNKASD GSLVATYTYN HDGTRRNKVT AQGTTNYNWD ASGNLIREIG PNGTYCYYYV SGKLIAFENN QQLYIVHDNL RGDVISLSMT DDYGNTDQEN RYDYDPWGTP ICEDESVKSP FRYAGYYYDT ETGLYYLKSR YYSPALGRFL TRDPHSFINH ADPQTLNLYA YCGNNPVSTV DPTGHWDEEP SEGYVVSPDY LENTATARII NSNVFQNILM GISVGEGLRA LKFFKGAGNL KLTSDALKKI GTKAESSGIR AVKGTADDAW DFFRNQVNIS SIKEVKPGVF VGKDGNGLTF TYRAASKSGP PTIDVNGIQG LRKIKFLP
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