Gene Dtox_0111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_0111 
Symbol 
ID8427034 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp118923 
End bp119840 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content37% 
IMG OID645032507 
Productdimethyladenosine transferase 
Protein accessionYP_003189697 
Protein GI258513475 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0030] Dimethyladenosine transferase (rRNA methylation) 
TIGRFAM ID[TIGR00755] dimethyladenosine transferase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.294487 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00410281 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGTCGGAGT TGTCTTCACC GTCGAAGGTT TTTAACCTGT TTAAAGAGTT TAATTTTCAC 
ACTAATAAAA AATTGGGACA GAATTTTTTA ATAGACAGCA ATATTATCAG TAAAATAATA
TCTGCTGCGG ATTTAAGAAG TGAGGATCTG GTTGTAGAAA TCGGGCCCGG TCTGGGTGTT
TTGACTCAGT CTATTGCCGA TGAAGTTAGC CGGGTTTTGT CTATAGAAAT TGATCGGAAA
TTACAGCCTA TTTTAGAAGT TAACTTAAAG GAATATAGCA ATACAAAGGT AATTTTTCAA
GATGCCCTGA AAACAGATTT TGACCGTTTG GTTTATGCAG AAGCAGGTGG CAAAAGTCGC
AGCTATAAAG TAATAGCTAA TTTACCTTAT TATATTACTA CTCCTTTATT GATGCATATA
CTGGAAAGTA AATTCAATGT GGAATTGATT GTTATAATGG TACAACGTGA GGTGGCTGAG
AGAATGACAG CCCCACCGGG AAAAAAAGAT TACGGGGCAT TAAGCGTGGC AGTGCAGTAT
TATACTGAGC CTGAGATAAT CTGTCGTGTA CCCAAAACAG TATTTATACC TGCACCCGAA
GTAGATTCTA CGGTAATTAG GCTAATAAAA AGAAAATTGC CGCCGGTGCA GCTGAAAAGT
GAAAAACTAT TCTTTAATTT AGTCAGAACC GCCTTTAACC AAAGAAGAAA GACAGTTTTA
AACGCGATGC AAGGATCTAA TTGGGGATTA ATGAAGGAAG AGTGGAAAAT TATATTGGAG
AAAGCGGGTA TAGACCCAAT GCGCAGGGGC GAAACCTTTT CTTTGCAGGA TTTTGCCATG
CTTTCCAATT GTGTATATGA GACATTGAAA GAATTGTCAA CAGTATATCA GGAAGGTGAA
CAAATTCCGT TATATTAG
 
Protein sequence
MSELSSPSKV FNLFKEFNFH TNKKLGQNFL IDSNIISKII SAADLRSEDL VVEIGPGLGV 
LTQSIADEVS RVLSIEIDRK LQPILEVNLK EYSNTKVIFQ DALKTDFDRL VYAEAGGKSR
SYKVIANLPY YITTPLLMHI LESKFNVELI VIMVQREVAE RMTAPPGKKD YGALSVAVQY
YTEPEIICRV PKTVFIPAPE VDSTVIRLIK RKLPPVQLKS EKLFFNLVRT AFNQRRKTVL
NAMQGSNWGL MKEEWKIILE KAGIDPMRRG ETFSLQDFAM LSNCVYETLK ELSTVYQEGE
QIPLY