Gene Dtox_0109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_0109 
Symbol 
ID8427032 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp117330 
End bp118751 
Gene Length1422 bp 
Protein Length473 aa 
Translation table11 
GC content44% 
IMG OID645032505 
Product3D domain protein 
Protein accessionYP_003189695 
Protein GI258513473 
COG category[S] Function unknown 
COG ID[COG3583] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.472603 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00220414 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGTAAAT GTGAAAAATT AATAGGGGTA AACCTTAATA CAGCTAACAA TATTTCTGCA 
GATTTGCTCA ATGCCTGTGT TTTGGAAGGT GTTGAGAGCA AGATCGATGC CGGGATCAAG
ATCGGTGCCG GGTCTGGAAG CTATACCGAA AGAAATTACG ATGTTGTTTC TATGACTGAT
ACCGGGATTA CGAACGGTGG GGGGTCTGAG ATCAATGCCG GCAGCATTAC CGGTGTTGAG
TCTGAGATTG ATGCCGGGAT CGATATCGAA AATAATGCTG GTGTGCCGGG TGCTCTTTCG
CAGGCTGTTA ATCCTGTAGA GGAAGCTGGC GAATATGCCC TGGCAACAGA TAGCGGCCTT
AGTGAGCCGG AAGTGGAAAT ATGGATAAAG GAAAATGCTG GTAATGGCGG AGTGGAATCC
GAGCTGGTGA CAGCCGTTGT GGCAGGTAAG CGAGGTTTCT TCGCCAAAAA GGTTAATGTG
TTGGCAGTTG TTGCCGGAGT AGCCTTGTGC GCTGCAATTG GTTTATCTGT TTTTAACTGG
GCACAAAAAA ATATAACTCT ATCGGTTGAT GGCAAAAAGA TTATCACTAA AACTTTTGCT
TCAAATGTAC AGGAATTGAT TGAACAGAAA AAAATAAAGC TTAATGAAAA AGACAGGTTA
ATTCCTCAAC CTGATACAAA ACTGACAGAC GGATTAGAAG TAGCAGTTAT CAGAGCTTTG
CCGGTCAGTA TTGATGTAGC CGGTGAGAAA CTGGAGATAA CCAGTTCAGC TCAAAATGTG
AAGCAATTAA TTGATGAGCA GAAAATTGGA TTAAACGAGA GGGATGAGGT TATACCGGCT
CTCAATGAGA AGCTCTCACC CGGTATGAAA ATTCAGGTTA CCCGTGTAGA GCAGAAGACT
ATAGAGAAGG AAGTTCAGCT TGCTTATCGC ACAGAGACCA GATACACACC GTCACTATCC
AGAGGCATAA CCAGGATATC TCGTGCCGGT AAAGCCGGAA CCGAAAAACA GATTTGGCAG
GTTACTTACA GGAACGGAGA AGAAGTCAGC AGTCAAATGG TTGGCAGTCA AATTGTATCA
ACTCCCGTAT CCAAAATAGT TGATTATGGT ACGAAGCAGC AGACAATTGA TCGTAGCGGC
CAGACATACC AATACTCACA GGAAATGTAT GTGATTGCAA CTGCTTATAC TTATACAGGC
CGTAATACCG CTTCCGGTAT ACCTCCTTCA GTCGGTTCCG TAGCTGTAGA TCCGCGTGTG
ATACCAATTG GCACCAGACT TTATATTGAA GGCTATGGTT ACGGAAGAGC TGTTGATACA
GGTGGTTCAA TAAAAGGAAA TAAAGTTGAT GTATTTTTGG AATCTGAACA ACAGTGCAGA
AAATGGGGTG TACGGAAGGT AAAAGTATAT GTACTGGGAT AA
 
Protein sequence
MGKCEKLIGV NLNTANNISA DLLNACVLEG VESKIDAGIK IGAGSGSYTE RNYDVVSMTD 
TGITNGGGSE INAGSITGVE SEIDAGIDIE NNAGVPGALS QAVNPVEEAG EYALATDSGL
SEPEVEIWIK ENAGNGGVES ELVTAVVAGK RGFFAKKVNV LAVVAGVALC AAIGLSVFNW
AQKNITLSVD GKKIITKTFA SNVQELIEQK KIKLNEKDRL IPQPDTKLTD GLEVAVIRAL
PVSIDVAGEK LEITSSAQNV KQLIDEQKIG LNERDEVIPA LNEKLSPGMK IQVTRVEQKT
IEKEVQLAYR TETRYTPSLS RGITRISRAG KAGTEKQIWQ VTYRNGEEVS SQMVGSQIVS
TPVSKIVDYG TKQQTIDRSG QTYQYSQEMY VIATAYTYTG RNTASGIPPS VGSVAVDPRV
IPIGTRLYIE GYGYGRAVDT GGSIKGNKVD VFLESEQQCR KWGVRKVKVY VLG