Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtox_0089 |
Symbol | |
ID | 8427011 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum acetoxidans DSM 771 |
Kingdom | Bacteria |
Replicon accession | NC_013216 |
Strand | - |
Start bp | 94315 |
End bp | 96738 |
Gene Length | 2424 bp |
Protein Length | 807 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 645032484 |
Product | S-layer domain protein |
Protein accession | YP_003189675 |
Protein GI | 258513453 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00025043 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAAATCAA AATACACACT TTTTTGCCTA ACATTTCTCA TCTCAATTTT GTTTTGCGGG TCAGCCTATG CTGATTTTAA ACCACCGGCA TATACAGATA TTAAGGGTTC CTTTGCAGAG GATTCAATCA ACAAACTGGT TGAAAAAGGC ATCATTACGG GTGTTAACTC TCAAGAATTT TGTCCTAACA ACAATCTCAA CCGTTATGAT TTTACTGTTT TAATTGCCAA AACATTAGGC ATACAACCCA TTTTTCCGAC TGCAGCCACT TTCTCTGATT TACCGTCGGG AACATTGGAA ACAGGCTACG TAGAGGCTTT ATTTAAACTG GGTATGATAA AAGGCATAGA CAAAAATCAT TTTGGAGTAA ACGAGCCGGT GTTAAGACAG GACGCCGCTG TGTTAATTCA AAGAACAATG GCAGAAGAAA TTGATGTGCC TTCTTTAAGC GGCAGATACG CCGATTCAGG TCAAATCGCT TCTTATGCTA TAAAAGGCGT AGACTTTGTT TCATGGAAGG GCTGGATGAA CGGCAGCGAA AATAATTTCT ATCCATTACG GCCAATAACA AGAGCGGAAG CTGCTGTTTT AGCTTATAGG TTACTCATTA TCAGAACAGG ACAGGCCTCC ACAGCTTTTG AGCACATATC TTCCGACCTG GTACAGTTAG AAACTGAATC AGAGTGTCAA CTGGAACAAC GCGGCAGCAA AAAAGCTTTA AATTTTTCCA CAACCTATGG ATTGGATAAC CAAGCGCTTT TTTCAGTTAC TCCAAGCGGC AGCATAGTTT CCGGAAAAGA ATCCGGAACC GGTTTGATTA CAGTAAACTC CGGCAGCAAT TATTATTCTG TAACAACAAA AGTATCTGCC CCTAAAGCAA ACAACACCGT ACAAAACTCC GTATACAAGG ATTTTGCTGC CGAACTGGCC AATAAATCAA CATATACTGT AACACAAACA GAACCTGATC CTGTACACAG CCAGGTAGAA AAAAACAGTT ATCCCGGCCC ACCGGAAGGG ATTACTTCCA GCAGCGATAC ATGGACAGGG TTTCTGCGGC AGAAATCACG TGATATCACA GTAGACTTGA AAAAGATATG TTCTATATCG TATATTTCTA TGGAATTTAA CAGAAACGAA ACTATGGGTA TATATTTACC TGATTACATG CAATGCTCTG CATCACCTGA CGGCATCAGC TGGTATAAAT TAGGTTATGC GTACCGTAAC AGTGATTTGC CCGCCGGCAC AAAAGAGCAA AACGTTACGC TAACCCTTGT TTTACCAGCG GCAAACTTTC GTTATGTAAG AGTATCCTTT CCTGTAGAGT TATGGGTTTT TGCAAGACAC TTATCCATCA GAGGAGACGA GGCTGCTGTT GATCCAGTCA TTCTTGCCCA CTCTGACTCA GCAAATAAAA ATGTTAGCAG CAGTCCCTAT ATCAAAGTTC CCGGAAGCAA AAATATTTTG CTTATTTATA CGGGAGATAA AAGCAAGAAG GCAGATTGGA CAGCAGGTGA TTTTATTCCG GTTGTAGCTT ATATGGATGA AAACAGACGA ATCAAGGGCA GCATGTTCGA TACAATGCTG TTTCTCCCTT ATTCGTTTGA GATAACTTGT ACAAAAGAAA GCTGGAATGC TTATCTGGAA GATTTGTTTA ACCCGGTCAA GCAGCTTAAC GCACTTAATT TAGCAGTGGG GCAAATAAAC CAGATAACCG GTCAGCAAGA AAAGGAAAAA GTTATTCTCT CACTTCCTTA TCCCAGTGTT GACCAGCAAG ACTTTGGGCA ACTGGACAAA AATGAACCTT CACTTTCTTT TTCTGAGACT CAATTAGGAA AGGAACAGGC TGAAAAAAAC AGGTTTGCTG CAGTACAATG GTACTATAAC AAACTGATGG AAAAATGGCA GCAAGCTGAT TTCAAAAACC TCGAGTTGAT AGGTATCTAC TGGTACGAGG AATCAGTTGA TTATCATAAT ATCAAGAGTG AAACAGCATT GGTGCAAAAA ACCGCCCGAC TGGTTCAGGA CAACAAACTA AAATTTTTCT GGATTCCTTA TTACGGTGCG ATTGGCTTTG AGGATTGGAA AAAGTTTGGT TTTGACTACG CTTTTATTCA ACCCAGCTTC TATAACAGTG AACAGCTTCC GATTGAACGC ATGGATAAGG CAGCCGAACT TGCCAGGAAA TATAATATGG GGATTGAAAT AGAATTCGAT GATGAAATTC TTAATGGGGA TTACTTCAAC GATTTACTCC ATAAACAACT GGATAAAGCG CATCAGCTTG GTTTAGATGA CAGTAAAACG ACCAGAGCCT TTTACATGGG CTTGCGCGCC ATTGTCACTT GTTCCCGCAG CAATCAACCA CAGGCTAGGG CCACCTACGA TCTTCTCTAT AAATGGCTTA ACGGCAACTA CTAA
|
Protein sequence | MKSKYTLFCL TFLISILFCG SAYADFKPPA YTDIKGSFAE DSINKLVEKG IITGVNSQEF CPNNNLNRYD FTVLIAKTLG IQPIFPTAAT FSDLPSGTLE TGYVEALFKL GMIKGIDKNH FGVNEPVLRQ DAAVLIQRTM AEEIDVPSLS GRYADSGQIA SYAIKGVDFV SWKGWMNGSE NNFYPLRPIT RAEAAVLAYR LLIIRTGQAS TAFEHISSDL VQLETESECQ LEQRGSKKAL NFSTTYGLDN QALFSVTPSG SIVSGKESGT GLITVNSGSN YYSVTTKVSA PKANNTVQNS VYKDFAAELA NKSTYTVTQT EPDPVHSQVE KNSYPGPPEG ITSSSDTWTG FLRQKSRDIT VDLKKICSIS YISMEFNRNE TMGIYLPDYM QCSASPDGIS WYKLGYAYRN SDLPAGTKEQ NVTLTLVLPA ANFRYVRVSF PVELWVFARH LSIRGDEAAV DPVILAHSDS ANKNVSSSPY IKVPGSKNIL LIYTGDKSKK ADWTAGDFIP VVAYMDENRR IKGSMFDTML FLPYSFEITC TKESWNAYLE DLFNPVKQLN ALNLAVGQIN QITGQQEKEK VILSLPYPSV DQQDFGQLDK NEPSLSFSET QLGKEQAEKN RFAAVQWYYN KLMEKWQQAD FKNLELIGIY WYEESVDYHN IKSETALVQK TARLVQDNKL KFFWIPYYGA IGFEDWKKFG FDYAFIQPSF YNSEQLPIER MDKAAELARK YNMGIEIEFD DEILNGDYFN DLLHKQLDKA HQLGLDDSKT TRAFYMGLRA IVTCSRSNQP QARATYDLLY KWLNGNY
|
| |