Gene Dtox_0089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_0089 
Symbol 
ID8427011 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp94315 
End bp96738 
Gene Length2424 bp 
Protein Length807 aa 
Translation table11 
GC content41% 
IMG OID645032484 
ProductS-layer domain protein 
Protein accessionYP_003189675 
Protein GI258513453 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00025043 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAATCAA AATACACACT TTTTTGCCTA ACATTTCTCA TCTCAATTTT GTTTTGCGGG 
TCAGCCTATG CTGATTTTAA ACCACCGGCA TATACAGATA TTAAGGGTTC CTTTGCAGAG
GATTCAATCA ACAAACTGGT TGAAAAAGGC ATCATTACGG GTGTTAACTC TCAAGAATTT
TGTCCTAACA ACAATCTCAA CCGTTATGAT TTTACTGTTT TAATTGCCAA AACATTAGGC
ATACAACCCA TTTTTCCGAC TGCAGCCACT TTCTCTGATT TACCGTCGGG AACATTGGAA
ACAGGCTACG TAGAGGCTTT ATTTAAACTG GGTATGATAA AAGGCATAGA CAAAAATCAT
TTTGGAGTAA ACGAGCCGGT GTTAAGACAG GACGCCGCTG TGTTAATTCA AAGAACAATG
GCAGAAGAAA TTGATGTGCC TTCTTTAAGC GGCAGATACG CCGATTCAGG TCAAATCGCT
TCTTATGCTA TAAAAGGCGT AGACTTTGTT TCATGGAAGG GCTGGATGAA CGGCAGCGAA
AATAATTTCT ATCCATTACG GCCAATAACA AGAGCGGAAG CTGCTGTTTT AGCTTATAGG
TTACTCATTA TCAGAACAGG ACAGGCCTCC ACAGCTTTTG AGCACATATC TTCCGACCTG
GTACAGTTAG AAACTGAATC AGAGTGTCAA CTGGAACAAC GCGGCAGCAA AAAAGCTTTA
AATTTTTCCA CAACCTATGG ATTGGATAAC CAAGCGCTTT TTTCAGTTAC TCCAAGCGGC
AGCATAGTTT CCGGAAAAGA ATCCGGAACC GGTTTGATTA CAGTAAACTC CGGCAGCAAT
TATTATTCTG TAACAACAAA AGTATCTGCC CCTAAAGCAA ACAACACCGT ACAAAACTCC
GTATACAAGG ATTTTGCTGC CGAACTGGCC AATAAATCAA CATATACTGT AACACAAACA
GAACCTGATC CTGTACACAG CCAGGTAGAA AAAAACAGTT ATCCCGGCCC ACCGGAAGGG
ATTACTTCCA GCAGCGATAC ATGGACAGGG TTTCTGCGGC AGAAATCACG TGATATCACA
GTAGACTTGA AAAAGATATG TTCTATATCG TATATTTCTA TGGAATTTAA CAGAAACGAA
ACTATGGGTA TATATTTACC TGATTACATG CAATGCTCTG CATCACCTGA CGGCATCAGC
TGGTATAAAT TAGGTTATGC GTACCGTAAC AGTGATTTGC CCGCCGGCAC AAAAGAGCAA
AACGTTACGC TAACCCTTGT TTTACCAGCG GCAAACTTTC GTTATGTAAG AGTATCCTTT
CCTGTAGAGT TATGGGTTTT TGCAAGACAC TTATCCATCA GAGGAGACGA GGCTGCTGTT
GATCCAGTCA TTCTTGCCCA CTCTGACTCA GCAAATAAAA ATGTTAGCAG CAGTCCCTAT
ATCAAAGTTC CCGGAAGCAA AAATATTTTG CTTATTTATA CGGGAGATAA AAGCAAGAAG
GCAGATTGGA CAGCAGGTGA TTTTATTCCG GTTGTAGCTT ATATGGATGA AAACAGACGA
ATCAAGGGCA GCATGTTCGA TACAATGCTG TTTCTCCCTT ATTCGTTTGA GATAACTTGT
ACAAAAGAAA GCTGGAATGC TTATCTGGAA GATTTGTTTA ACCCGGTCAA GCAGCTTAAC
GCACTTAATT TAGCAGTGGG GCAAATAAAC CAGATAACCG GTCAGCAAGA AAAGGAAAAA
GTTATTCTCT CACTTCCTTA TCCCAGTGTT GACCAGCAAG ACTTTGGGCA ACTGGACAAA
AATGAACCTT CACTTTCTTT TTCTGAGACT CAATTAGGAA AGGAACAGGC TGAAAAAAAC
AGGTTTGCTG CAGTACAATG GTACTATAAC AAACTGATGG AAAAATGGCA GCAAGCTGAT
TTCAAAAACC TCGAGTTGAT AGGTATCTAC TGGTACGAGG AATCAGTTGA TTATCATAAT
ATCAAGAGTG AAACAGCATT GGTGCAAAAA ACCGCCCGAC TGGTTCAGGA CAACAAACTA
AAATTTTTCT GGATTCCTTA TTACGGTGCG ATTGGCTTTG AGGATTGGAA AAAGTTTGGT
TTTGACTACG CTTTTATTCA ACCCAGCTTC TATAACAGTG AACAGCTTCC GATTGAACGC
ATGGATAAGG CAGCCGAACT TGCCAGGAAA TATAATATGG GGATTGAAAT AGAATTCGAT
GATGAAATTC TTAATGGGGA TTACTTCAAC GATTTACTCC ATAAACAACT GGATAAAGCG
CATCAGCTTG GTTTAGATGA CAGTAAAACG ACCAGAGCCT TTTACATGGG CTTGCGCGCC
ATTGTCACTT GTTCCCGCAG CAATCAACCA CAGGCTAGGG CCACCTACGA TCTTCTCTAT
AAATGGCTTA ACGGCAACTA CTAA
 
Protein sequence
MKSKYTLFCL TFLISILFCG SAYADFKPPA YTDIKGSFAE DSINKLVEKG IITGVNSQEF 
CPNNNLNRYD FTVLIAKTLG IQPIFPTAAT FSDLPSGTLE TGYVEALFKL GMIKGIDKNH
FGVNEPVLRQ DAAVLIQRTM AEEIDVPSLS GRYADSGQIA SYAIKGVDFV SWKGWMNGSE
NNFYPLRPIT RAEAAVLAYR LLIIRTGQAS TAFEHISSDL VQLETESECQ LEQRGSKKAL
NFSTTYGLDN QALFSVTPSG SIVSGKESGT GLITVNSGSN YYSVTTKVSA PKANNTVQNS
VYKDFAAELA NKSTYTVTQT EPDPVHSQVE KNSYPGPPEG ITSSSDTWTG FLRQKSRDIT
VDLKKICSIS YISMEFNRNE TMGIYLPDYM QCSASPDGIS WYKLGYAYRN SDLPAGTKEQ
NVTLTLVLPA ANFRYVRVSF PVELWVFARH LSIRGDEAAV DPVILAHSDS ANKNVSSSPY
IKVPGSKNIL LIYTGDKSKK ADWTAGDFIP VVAYMDENRR IKGSMFDTML FLPYSFEITC
TKESWNAYLE DLFNPVKQLN ALNLAVGQIN QITGQQEKEK VILSLPYPSV DQQDFGQLDK
NEPSLSFSET QLGKEQAEKN RFAAVQWYYN KLMEKWQQAD FKNLELIGIY WYEESVDYHN
IKSETALVQK TARLVQDNKL KFFWIPYYGA IGFEDWKKFG FDYAFIQPSF YNSEQLPIER
MDKAAELARK YNMGIEIEFD DEILNGDYFN DLLHKQLDKA HQLGLDDSKT TRAFYMGLRA
IVTCSRSNQP QARATYDLLY KWLNGNY