Gene Dtox_0079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_0079 
Symbol 
ID8427001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp83925 
End bp85343 
Gene Length1419 bp 
Protein Length472 aa 
Translation table11 
GC content45% 
IMG OID645032474 
Productsulfite reductase, dissimilatory-type alpha subunit 
Protein accessionYP_003189665 
Protein GI258513443 
COG category[C] Energy production and conversion 
COG ID[COG2221] Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits 
TIGRFAM ID[TIGR02064] sulfite reductase, dissimilatory-type alpha subunit 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00895791 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAGCTTTG AACCGCAAGA ACCCAAAAAA GTCATAAAGT ATGAAGACGT GAGAATCTAC 
ACTGATGCAG AAATTAATAA CTACACGGAA GAAGAACTTA AAGCTTTTAA AATTAAGTAT
GATATTCCTG ATTTAGAGGA ATTGGAAAAC GGTCCTTGGC CCAGTTTTGT TGCTGATGCC
AAGCAAGCCG CTTTGCACAG AAGCAAATTG CCTGCTGACC GTATGCTGAT TGACCCCAAT
GGTGTTGAAG ATATGCTGGG TCAGCTTCAG GTTTCCTTTG ATGAAGGGGA AACTCACTGG
AAGCACGGCG GTATCGTAGG CGTGTTCGGT TATGGCGGTG GTGTTATCGG TAGATATTCC
GATTTGCCGG AAAGATTTCC CTCTATTGCT CATTTCCACA CTGTACGTTT AAACCAGCCT
GCCAGTAAAT TTTATAATAC TGATTTTCTG AAATCTCTTT GTGATCTCTG GGACTATCGT
GGCAGTGGTA TGTTGAACCT GCACGGTTCT ACCGGTGACA TCATTCTCTT GGGAACCACT
ACCGAACAGT TAGAGCCTAT TTTCTTTGAA GTTACTCACG TAATGGACCA GGATATCGGA
GGTTCCGGTT CAAACCTGCG TACACCTTCC TGCTGCATTG GTAAAGCTCG TTGTGAGTGG
GCATTATATG ATACACAGGA AATGTGCTAT GAAATGACAA ATTATTATCA GGATGAATTA
CACCGTCCTG CTTTCCCGTA TAAATTTAAG TTCAAGTTTG ACGGTTGCCC GAACGGTTGC
GTAGCTTCCA TCGCTCGTTC CGATATGTCT TTTATCGGCA CATGGAGAGA CGACATTCGT
ATTGACCAGG CTGCTGTACA GGCTTATATT AACGGTGAAT ATGCTCCTAA CGCTGGCGCT
CATGCCGGTA AAGACTGGGG CAAGTTTGAT ATTAAGAAGG AAGTTTTGGA TCTTTGCCCG
ACAAAGTGTA TGTGGATGGA AGGTGGAGAG CTCAAAATTG ACAATGCTGA GTGTACACGT
TGCATGCACT GTATTGCCGT AATGCCGAGA GCGCTGCGTC CCGGTACTGA TACTGGTGTA
ACCATTCTCT GCGGAGCAAA AGCACCTATT TTGGACGGTG CTCAAATGTC TACATTGATC
GTTCCCTTTA TGAAAGCAGA ACCTCCCTAT GATAATATTA AAGAATTTAT TGAGAAAGTA
TGGGAACTGT GGATGGAAGA AGGCCGTAAC CGCGAGCGTT TGGGTGAAAT GATTCAGCGT
ATTACTCTGC CGAAATTCAT TGAAACTATT GGTTTGCCGG CTACTCCTCA AATGGTTAAG
GCTCCGCGTT CTAACCCCTA TATCTTCTGG AAGGAAGAAG ACGTACCGGG CGGTTGGGAC
AGAGACATTA ACGAGTACAG AGCGAGACAT AAGAGATAA
 
Protein sequence
MSFEPQEPKK VIKYEDVRIY TDAEINNYTE EELKAFKIKY DIPDLEELEN GPWPSFVADA 
KQAALHRSKL PADRMLIDPN GVEDMLGQLQ VSFDEGETHW KHGGIVGVFG YGGGVIGRYS
DLPERFPSIA HFHTVRLNQP ASKFYNTDFL KSLCDLWDYR GSGMLNLHGS TGDIILLGTT
TEQLEPIFFE VTHVMDQDIG GSGSNLRTPS CCIGKARCEW ALYDTQEMCY EMTNYYQDEL
HRPAFPYKFK FKFDGCPNGC VASIARSDMS FIGTWRDDIR IDQAAVQAYI NGEYAPNAGA
HAGKDWGKFD IKKEVLDLCP TKCMWMEGGE LKIDNAECTR CMHCIAVMPR ALRPGTDTGV
TILCGAKAPI LDGAQMSTLI VPFMKAEPPY DNIKEFIEKV WELWMEEGRN RERLGEMIQR
ITLPKFIETI GLPATPQMVK APRSNPYIFW KEEDVPGGWD RDINEYRARH KR