Gene Dtox_0028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_0028 
Symbol 
ID8426950 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp30609 
End bp31715 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content44% 
IMG OID645032424 
ProductRadical SAM domain protein 
Protein accessionYP_003189615 
Protein GI258513393 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0502] Biotin synthase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTACTA TAAATCTTGA AGCAATTATC GACAAGGCCT TGAACCGAAA TACTCTTTCA 
AAAGAAGAAA TTAAATTTCT TCTTAAGCTG TCTGACCCTC TGATGAAGGA AAAAGTTTTT
CTAACAGCCA GGGAATTGCG CAACAGATAT TTTCAGGATC GGGTTTTCCT ATATGGATTT
ATTTATTTCT CTACTTATTG CAGGAATGAT TGCAGCTTTT GCTATTATCG CAAATCCAAT
AACTTGTGCC GGAGGTATCG CAAGACGGCA GCGGAAGTTG CTGATATCGC CCGTGCCCTG
GCTGAGTCAG GAGTATATCT CATTGATTTA ACCATGGGTG AGGATCCCCT GTACCTTTCA
GACAGTACGG AGGGACAGGA GAAACTGTTG GAAATTGTTA GAATGGTGAA AGAAAGTACA
GGTTTGCCGG TTATGATATC TCCTGGTGTT GTAGCGGCCG GCATGTTAAA AAAATTAAAA
GAGGCCGGGG CCGATTGGTA TGCCTGCTAT CAGGAAACTC ATAACCGGCG GTTGTATAAA
AAACTAAGAC TAAACCAGAG CTATAATGAA AGATGGGCTA TAAAGGTATA TGCAAAAACT
ATCGGCATGC TGGTAGAAGA AGGTCTATTG GTTGGTGTGG GGGACAGCAT TGACGATATT
GTTAATTCTT TAATGGAAAT GAAAAGCCTG GGGGCGGAGC AGGTCAGGAC GATGACTTTC
GTACCCCAGC AAGGTACTCC GCTGTATGGA ATAGATGCGC CTGGTGACGC TCTGGAGCTT
AATATTATTG CCGTTATGCG TATCCTATTT CCGGATAGGC TGATTCCTGC TTCTCTGGAT
GTTAAGGGTA TATTTGGCTT GAAAGAGCGT CTTGATGCAG GAGCAAATGT TGTTACTTCT
TTGATTCCGC CTGAGCGGGG ATTGGTTGGA GTTTCACAGA GCACGCTGGA TATCTCTGAG
GGGCACAGAA CGGTTAAAGG GATCATGCCG GCTTTGCAGT CCTGCGGGTT GAAGCCGGCG
ACTCTTGCTG AATATACCAA ATGGATAAAA GAAAAACAGG GCCATCCGAT AAAAATTGAT
AAAAGGAAGG AAATGCTGTG CTGGTAG
 
Protein sequence
MVTINLEAII DKALNRNTLS KEEIKFLLKL SDPLMKEKVF LTARELRNRY FQDRVFLYGF 
IYFSTYCRND CSFCYYRKSN NLCRRYRKTA AEVADIARAL AESGVYLIDL TMGEDPLYLS
DSTEGQEKLL EIVRMVKEST GLPVMISPGV VAAGMLKKLK EAGADWYACY QETHNRRLYK
KLRLNQSYNE RWAIKVYAKT IGMLVEEGLL VGVGDSIDDI VNSLMEMKSL GAEQVRTMTF
VPQQGTPLYG IDAPGDALEL NIIAVMRILF PDRLIPASLD VKGIFGLKER LDAGANVVTS
LIPPERGLVG VSQSTLDISE GHRTVKGIMP ALQSCGLKPA TLAEYTKWIK EKQGHPIKID
KRKEMLCW