Gene Dtox_0007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_0007 
Symbol 
ID8426926 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp6533 
End bp8968 
Gene Length2436 bp 
Protein Length811 aa 
Translation table11 
GC content38% 
IMG OID645032401 
ProductDNA gyrase, A subunit 
Protein accessionYP_003189595 
Protein GI258513373 
COG category[L] Replication, recombination and repair 
COG ID[COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit 
TIGRFAM ID[TIGR01063] DNA gyrase, A subunit 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCTGCCG GTAAAGTTGT ACCGATTAAC TTGAAAGACG AAATGAAGAA CTCTTATATG 
GATTATGCTA TGAGCGTTAT AGTCGGACGG GCCCTGCCTG ATGTCAGAGA TGGTTTAAAG
CCTGTACACA GGAGAATTAT CTATGCTATG CATGGTTTAG GAATGACTCC TGATAAAGCT
CATAAAAAGT GCGCTCATAT TGTAGGTGAA GTACTGGCCA AGTATCACCC GCATGGTGAT
GTGGCTGTTT ATGATGCTTT AGTACGTATG GCACAAAGTT TTTCTATTCG TTATACCCTG
GTGGACGGTC ACGGCAACTT TGGTTCGGTA GATGGCGATT CTGCAGCGGC TATGCGTTAT
ACAGAAGCTC GTATGACTAA GATTGCTACA GAGATGCTCA CTGATATTGA AAAAGAAACG
GTGGACTTTA TTCCTAATTA TGATGAGAGT ATAGAGGAAC CAACTGTTTT GCCGGCCAGG
GTACCAAATT TACTAATCAA TGGTTCCTCC GGTATTGCCG TAGGCATGGC TACAAATATA
CCACCACATA ATCTTGCTGA AGTAATAGAT GGTGTTATAA TGCTGGTGGA TAACCCGGAA
GCCGATTCCA GGACATTAAT GAAAGCAGTA AAGGGTCCCG ATTTTCCTAC TGCCGGTAAA
ATAATGGGTG TACAGGGTAT AATATCGGCT TATACCACAG GCAGGGGTTC CATAAAAATA
CGTGCTCAAG CCGAAATAGA AGAAATGAGT GGCGGTAAAA ACAGAATAGT TGTTAATGAA
ATACCTTATC AGGTTAACAA AGCCCGTTTA ATTGAAAAAA TAGCTGAATT AGTAAGGGAT
AAAAAGATAG AGGGTATTTC TGATTTGCGT GATGAATCAG ATCGCAAGGG TATGCGTATA
GTTATAGAAT TAAAGAGAGA TGTTTACCCG CAGCTTGTTT TAAATCAATT ATACAAACAT
ACTAAAATGC AAGATAGCTT TGGTGTAATC ATGCTGGCAC TGGTTGACGG AAGACCTAAT
GTTTTGAATT TGAGGGATAT GCTTTATTAT TATCTGGAGC ATCAGAAAGA TATTATAATC
CGCCGTACTA CCTTTGATTT GAAAAAAGCT GAGGCCAGAG CTCATATTGT AGAAGGTTTA
AGAATTGCAC TGGCTAACCT GGATGAAGTT ATTAATACTA TTAGATCTTC GCAAACGGTT
GAAATTGCCA AGCAGGGCTT AGTTGAAAAA TTTCTTTTAA CAGAGATTCA GGCCCAGGCT
ATTTTGGAAA TGAGACTACA ACGTTTAACC GGCTTAGAAA TAGAAAAGCT GGAACAAGAA
TACCGGGATC TGATGGAAAA GATAGCTTAT TTGGAAGCAA TTCTCTCTGA TGAAGGAAAA
ATTTTAGCTA TTATTAAAGA TGAGTTATTG GAAATCAGGA AAAAATATGC TGATAAAAGA
CGTACTGTAA TAAGTGATGA AGACACTGCC TTTGACGTTG AAGATTTAAT AGCTGAAGAA
GATATGGTAA TTACTATAAC CAGAAACGGT TATATTAAAA GACTGCCTCT GGATACTTAT
CGTAGCCAAA AAAGAGGCGG ACGCGGCATT TCAGCTATGG GAGTAAAAGA GAAAGATTTT
CTGAAGCATT TATTTATTAC TTCCACTCAC CATTATATTT TATTCTTCAC TAATAAAGGT
AAAGTATACC GTTTAAAGGT ACATGAAATT CCTGAAGCCG GTCGCCAATC AAAAGGTACT
GCTATTATAA ATTTACTCTT TGTCGGAACT GAAGAAAAAG TAACAACTGT AATACCGGTA
AAAGAGTTTA ATAAAGATGA ATTCCTTTTT ATGTGTACTA AGAATGGTAT TGTGAAAAAG
ACTTCTCTTA ATGAATTTGA CACTTCAAGG CGAGACGGTA TTATTGCCCT AACTCTGGAT
GATCATGACG ACTTGGTAGA TGTCAGGTTA ACCAACGGTC AGGAAGAGAT TATTATTGGA
ACACAAAAAG GGCTGGCTAT CAGGTTTTCT GAAGATGATG TACGTAAACT GGGACGTATA
GCTAAAGGTG TAAGGGGTAT AGGTCTAATT GAAGGTGATT TTGTAGTAGG TATGGATACT
GTTAGAAATG AAGGGGATTT GCTGGTAGTT ACTAAAAATG GTTTTGGTAA GAAAACACCT
ATATCTGAGT ACCGTTTACA GACAAGAGGC GGTAAAGGAA TAATTAATGT AAAAATTTCG
GATCGCAATG GCCCAGTTGT TTCTCTATTG GTGGTTAAAC CAGATGAAGA AATAATGATG
CTTAGCTCTG AAGGGATTAT AATCCGCATG AAGGTAAATG AAATTTCAAC TACAGGCAGG
GCGACTCAAG GTGTAACTTT AATGAAATTA TCTTCCGGTG ACAGTGTGGC GACAATAGCC
AAAGTGAATG CAGAAGTAGA TGCCGATGTT GAATAA
 
Protein sequence
MSAGKVVPIN LKDEMKNSYM DYAMSVIVGR ALPDVRDGLK PVHRRIIYAM HGLGMTPDKA 
HKKCAHIVGE VLAKYHPHGD VAVYDALVRM AQSFSIRYTL VDGHGNFGSV DGDSAAAMRY
TEARMTKIAT EMLTDIEKET VDFIPNYDES IEEPTVLPAR VPNLLINGSS GIAVGMATNI
PPHNLAEVID GVIMLVDNPE ADSRTLMKAV KGPDFPTAGK IMGVQGIISA YTTGRGSIKI
RAQAEIEEMS GGKNRIVVNE IPYQVNKARL IEKIAELVRD KKIEGISDLR DESDRKGMRI
VIELKRDVYP QLVLNQLYKH TKMQDSFGVI MLALVDGRPN VLNLRDMLYY YLEHQKDIII
RRTTFDLKKA EARAHIVEGL RIALANLDEV INTIRSSQTV EIAKQGLVEK FLLTEIQAQA
ILEMRLQRLT GLEIEKLEQE YRDLMEKIAY LEAILSDEGK ILAIIKDELL EIRKKYADKR
RTVISDEDTA FDVEDLIAEE DMVITITRNG YIKRLPLDTY RSQKRGGRGI SAMGVKEKDF
LKHLFITSTH HYILFFTNKG KVYRLKVHEI PEAGRQSKGT AIINLLFVGT EEKVTTVIPV
KEFNKDEFLF MCTKNGIVKK TSLNEFDTSR RDGIIALTLD DHDDLVDVRL TNGQEEIIIG
TQKGLAIRFS EDDVRKLGRI AKGVRGIGLI EGDFVVGMDT VRNEGDLLVV TKNGFGKKTP
ISEYRLQTRG GKGIINVKIS DRNGPVVSLL VVKPDEEIMM LSSEGIIIRM KVNEISTTGR
ATQGVTLMKL SSGDSVATIA KVNAEVDADV E