Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtox_0002 |
Symbol | |
ID | 8426921 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum acetoxidans DSM 771 |
Kingdom | Bacteria |
Replicon accession | NC_013216 |
Strand | + |
Start bp | 1591 |
End bp | 2694 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 645032396 |
Product | DNA polymerase III, beta subunit |
Protein accession | YP_003189590 |
Protein GI | 258513368 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.226085 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTCA TCAGTACAAA AGACAATCTT CTTTATGCAA TTCAAACTGT ACAAAAAGCT GTTTCCCCAA AAAGCCTTTT GCCAATTTTA TCGGGAATTT TATTCAAAGC CTATGACAAT ACATTAATTG TAAGGGCAAC AGATCTTGAA CTAGGTATAG AATGCTTTTT GCCTGTAAAA GTTATAGAAA CAGGAGAAAT TGTTTTACCG TCGAAATATA TAATTGATAT TATAAGAAGA CTTCCTGATA CTGTTATTGA GTTTGAAAGC AACGATTATT TGAATTCAAT TACTATAAAA TATAAAAATT CACAGGCTAA TATACACGGC TTTGCGGCAG ATGAATTCCC GATGCTTCCA CCTTTAAACG ACGGTTTTAC TTTTTTAATT TCCACTAGCA TTTTTAAAAA AATGTTAAGA CAAACTATTT TTGCCACAGG TACAGATGAA AACAGACCTG TTTTTACCGG CATTCATTTT CAAATATTAG AACAGGAATT TAAAATGGTA GCAACTGATA CGCACAGATT AGCTATGATT ACAGAACATT TGCCCCTAAT TAAGCAGGAA TTGCCCGGTA TTATAGTACC AGGCAAAACG CTGAGTGAAC TATTAAAAAT ATTAAACTCA ACACAAGATG AAGAAATAAA GATTACCGTT ACTGAAAATC AAATTTTCTT TTTGCTTAAT GAAATAAATA TAATATCCAG GCTAATTAAA GGACAGTATC CAAATTATCA TCATGTTATA CCCAAAGACA TAATTGCTAA AATTAAAATT AAGTTAAGTG ATTTTATACA ATCTGTAGAA AGGGCTTCTC TTTTAAGCAG TTCAATATCT CAACATATAA GAATAGATTG CGAGAATAGT GATTTTATAG TCATTTCATC GAATAATGAA GCAGGTCACA TATATGAAGA AATACCGGTC TTTTTTGAAG GAGAAGCTTT ACAAATTTAT TTTAACAGTA AGTATTTGAT GGATGCGCTT AAAGCTGTAG ATTCAGAAGA AATTTATCTC GAATTATCGG GACCTATTAA TCCTTGTTTA TTGAGAACAG AAGACAGAAA CTACTTATCA ATTTTATTGC CGGTAAGACC TTAA
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Protein sequence | MKFISTKDNL LYAIQTVQKA VSPKSLLPIL SGILFKAYDN TLIVRATDLE LGIECFLPVK VIETGEIVLP SKYIIDIIRR LPDTVIEFES NDYLNSITIK YKNSQANIHG FAADEFPMLP PLNDGFTFLI STSIFKKMLR QTIFATGTDE NRPVFTGIHF QILEQEFKMV ATDTHRLAMI TEHLPLIKQE LPGIIVPGKT LSELLKILNS TQDEEIKITV TENQIFFLLN EINIISRLIK GQYPNYHHVI PKDIIAKIKI KLSDFIQSVE RASLLSSSIS QHIRIDCENS DFIVISSNNE AGHIYEEIPV FFEGEALQIY FNSKYLMDAL KAVDSEEIYL ELSGPINPCL LRTEDRNYLS ILLPVRP
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