Gene Aaci_3139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_3139 
Symbol 
ID8417643 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013207 
Strand
Start bp80257 
End bp81315 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content64% 
IMG OID645029258 
ProductFlp pilus assembly protein ATPase CpaE-like protein 
Protein accessionYP_003186524 
Protein GI257793126 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4963] Flp pilus assembly protein, ATPase CpaE 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGCGACG TGCCGCACCA ATGGCGCGCC ACTTGCCCTT TGCCCGTGGC GGGCGACGCC 
TGGGTGGTCG AGGCGCCGTT TGCCGAGCCT GAGACGTTGG CGGAAGCCGT TCGGAGCGGT
GTCTCGGTGC TTCTCGTCGG AAGCCCTGGG CAAGTGGATC CGGCGATCCG CACGATTCAA
GGGCTCGAGT GGCAGGTGGG GGAGGAGCTC GATCCGGAAG CGATCCTCGC TTGGATGCGC
ACGCATGGAG AGACCAAGGC GCCAAGGCCC GCGATCCGAA AGCACGCGGA AGCTGCCACG
GGCGTGGTGG CGGTCTTTGC CGGGCTATTG CCGACCGGCG GCGGGGTGGG GAAGGATACG
TTGGCGCTCA ACACCGCCGC GTGGCTGGCC AAACGCAAGA TCGACGTGGC CGTTGCCGAT
CTCGACCCTT TCGGCACGCT CGGTTCGAAA CTTCGGGAGG CGTCCTTTGA GACCGTCGAT
ATTTTCGCCG AGGAGCGGCC CGAGCCGGAT GTGGAGACGA TTCGACGGAT GTTCGCACCT
GTAAAACTCG GCTTTGGTTT GTTGCCATCG AGCGGCCAGG GGACGGTGCT TCCTGGAGAC
GGGGTGAAAC GCCTGATTCA CGCTGCGCGA CGCGCGTTTT CTGTGACGAT CCTGAATCTC
GGGAGCGGGC AGACCAACGC CTATTACGCG GCGCTGGAAG CCGCGACGCA TGCGTATCTG
GTCGGCCAGG GCGATCGAGG CAAGTTCCGT GCGTACAAGC GAGCGCTTGA GGAGTTGACG
CCGCTTTGTC GTCAAGCGCC ACGGGTCATC TTGAATCGGT TTTACGACAA GGACGCGCCA
AGGCTTTGGG AGGAGGAGTT CGCGGGATCG CCGCCCTTTG CGGCGATCTT CGAAGACAGG
CGTGTGTTCG AGGCGACGGA AGCGGGCGAA GCGGCGGCGC TGAAGGATCC GAAACGCCCG
TTTGGGCGAG CGATTGAGAA GATTGTGCAG GACATTCTTG GCGAAGAGCA AGCGAGCGAA
GAGCCGAGAA AGGAGGCGAG GCGCAAATGG CTATGGTGA
 
Protein sequence
MSDVPHQWRA TCPLPVAGDA WVVEAPFAEP ETLAEAVRSG VSVLLVGSPG QVDPAIRTIQ 
GLEWQVGEEL DPEAILAWMR THGETKAPRP AIRKHAEAAT GVVAVFAGLL PTGGGVGKDT
LALNTAAWLA KRKIDVAVAD LDPFGTLGSK LREASFETVD IFAEERPEPD VETIRRMFAP
VKLGFGLLPS SGQGTVLPGD GVKRLIHAAR RAFSVTILNL GSGQTNAYYA ALEAATHAYL
VGQGDRGKFR AYKRALEELT PLCRQAPRVI LNRFYDKDAP RLWEEEFAGS PPFAAIFEDR
RVFEATEAGE AAALKDPKRP FGRAIEKIVQ DILGEEQASE EPRKEARRKW LW