| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_3092 |
|---|
| Symbol | |
|---|
| ID | 8417596 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013207 |
|---|
| Strand | + |
|---|
| Start bp | 41864 |
|---|
| End bp | 42607 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 645029211 |
|---|
| Product | transcriptional regulator, LuxR family |
|---|
| Protein accession | YP_003186477 |
|---|
| Protein GI | 257793079 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGTGAAT CCGACATCAC CATGCAGGAA CTCATCGAGG AGTATCGACT TAATCGGCGC
CTACTCTTGG CGCGCTTGCG GGAAATGGAT CGTTCGGCGC GTGAGCGGCA GCGAACGCTC
CAACGCATCC GGTCGATGTC TTGGCCGAAG TGGCTCCGGC TCGATCTGGA GCAATACGCG
GACACGAAGG ATCGGCAGTA CTTGGAGGTT TTCGTCTACC AGGCAGAAGC GGTGTGGGAA
AGCCTGACGC CCAAGCAGCA GGTGGCGGTG CAGGAAATTC GTCGGGTCAT TCAAGAGCTG
CGCGAGGAGG AGATGGATCG CTCGTATCTG CGCAGCATGG CTCGGGACAT GTTGTTCACG
TTGGCGCAGA TGAGCCGATA CGGCGCGGTC CAAGAGCGGT TGTTGTGGGA ACGGGAGGAG
TTGTCGCGTC ATCGGGTGAC GCGTGCGGCG GCGGTGCAGG AGGCGCTGGA GCGCTTGGCG
GCGCAGGAGT CCTTCGAGGA CGAGTTGCTC GCGTTGCTCT CGGGCGAAGC GGAGGAGCGC
CCTAGGGTAC GCGTGTCGTT TCATCAGTTG TCGCCGCAGC AGCGCGAGGC GCTGAAGCTG
GCGTTGCAGG GGTTTAGCCG GAAGGAGATC GCGGAGATGC TGCATGTGCG CAAAGGCACG
GCGGACGTGC ATGTGCGGCG CGGGCGGAAG AAGTTCAAAA ACGGGGTGCA GTTGGCGCTC
GATTTGGGGG ACGAAGAGAT ATGA
|
|---|
| Protein sequence | MCESDITMQE LIEEYRLNRR LLLARLREMD RSARERQRTL QRIRSMSWPK WLRLDLEQYA
DTKDRQYLEV FVYQAEAVWE SLTPKQQVAV QEIRRVIQEL REEEMDRSYL RSMARDMLFT
LAQMSRYGAV QERLLWEREE LSRHRVTRAA AVQEALERLA AQESFEDELL ALLSGEAEER
PRVRVSFHQL SPQQREALKL ALQGFSRKEI AEMLHVRKGT ADVHVRRGRK KFKNGVQLAL
DLGDEEI
|
|---|
| |