Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aaci_3088 |
Symbol | |
ID | 8417592 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
Kingdom | Bacteria |
Replicon accession | NC_013207 |
Strand | + |
Start bp | 40134 |
End bp | 40763 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 645029207 |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_003186473 |
Protein GI | 257793075 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02859] RNA polymerase sigma-H factor [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACACGA CACTGGTATT TGCGGCAAAG CGCGGCGACC AGGACGCTTT CGCCGCACTC TATCGTGAAT TCCGCGTCAG GGTCTGGAGT TGGATACGAA ACTACTGGAT ACCCGGAGCC GACCGCGAGG ATCTGATGCA GCACGCGTGG ATCGGGTTCT GGGAGGCCAT ACGAGACTAC GACGTTCGCG GTAAAGTGCC GTTTCTGGCG TTTGCGAAGA TGTGCGTCGT GCGCGAGATC CAAACGGTGC TGCGGATGGC GCGCAGGCAA AAGCACACAA CACACTTGAC AGCGCTGTCG CTTGACGCGG AGTGCCCATG GATCGAGGAC GCAGAGCGCA CGGTGCTGGA CGTGTTCGTC GATCCCGCGG CACCGAGCGT AGAGGATGTG GTGTTCGGAC CGCCTAAGGG CGTGTCCGCG GAAGAACTCG TGGCATGGGC CGAGCGGCAC TGGGGGCTGA GATTGACGGA GCTCGAGCGC GAGGTGTGGC GGTTGCGGAT CGAGGGGCAT TCGTATGCGG AGATCCAGCG GATGTTAGGA TGCGGATATA AGACGGTGGA CAATGCGGTG CAGCGGCTGA GGAAAAAAGC GCGAAAGGCA CTTGCGCGTC AAGAACAAGC AGCGTCGTGA
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Protein sequence | MDTTLVFAAK RGDQDAFAAL YREFRVRVWS WIRNYWIPGA DREDLMQHAW IGFWEAIRDY DVRGKVPFLA FAKMCVVREI QTVLRMARRQ KHTTHLTALS LDAECPWIED AERTVLDVFV DPAAPSVEDV VFGPPKGVSA EELVAWAERH WGLRLTELER EVWRLRIEGH SYAEIQRMLG CGYKTVDNAV QRLRKKARKA LARQEQAAS
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