Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aaci_3017 |
Symbol | |
ID | 8417527 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
Kingdom | Bacteria |
Replicon accession | NC_013206 |
Strand | - |
Start bp | 56115 |
End bp | 58601 |
Gene Length | 2487 bp |
Protein Length | 828 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 645029143 |
Product | hypothetical protein |
Protein accession | YP_003186409 |
Protein GI | 257793010 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGGAAG TCCCTGCGCT TGTGCGCGTA AGCATCGCGC ATTCGACGTG GTTCATGGTC GTCATTGGCG CAATTGGCGC GTTTGCGTTG TATCGATCCG TCTTTCGCGC GCTCGGGCGC ATGGCTCAAC TCGGTACATT GGCCGTCATC GCCATGGCCG GGTTTGGCGT GGTGAAACTG CATGGTCTGA TCGCAGCGTG GCAGAACCGT ATGCTGCATC CAAGCACGCC GAAGGCCGCA ACCACCGCGA CCAACAGCCA TGCAATCATC AACCCGCTCA CATCCGGTAC AGGGCCAAAG CTCCCGCTTT CCGCACTGAA CGCGACAAAC CCGCTGGTGC ATGAGAATGC CTGGGTGATC GCGTTGGCCT TAGTGGCCGG AGTCCTCGGC CTACTGGCCT TCTTCGTATA TCGAGGCCTG TCTCCAACAG CAAAAGCGCA GTTCTTGCAA CGCATGCAGG CCACGGATTT CGATAGGAGC ACCCATCGTC GTGATGACGA TCCGAACAAG TTTTCACTCG TCGGGGTCGA AGTCGGCATC CGAAAAGATA ACGGCCGACC GATTCGCATT GAAGGGAAAG ACCGGTTTAT CAACACCTTA GTGCTTGGTT CCACCGGCAC GGGGAAGACA AGCCGTATCA TGCTCAAAGC TGTGTACCAG GACCTTCGTT CGATGGCAAA CGGCACTCCC ATGGACGTGA TCGCGATGGA CCCCGACGGC GGATTCGCAC AAGCCGCAGT GAACATGGCG AATCAGTTGG GCGTGGAGAC CATCATCATG GATTTGCGCG GCACGATGCC GAGTACGGTG TCGTTCAGCC CGTTCGGTGG CGAGATTGCG GACATCATCG ACAATGTGCG TGCTGCACTC CAAGAGAAGA TGGGCAAGCA GGACGGGTTC TTCCAAAACG CGCAGGACGA CTTGGTGCGG ACGGTGATAC AGGTTCAGGT GCCGCTTTGG CCAGAAGCGG ACTTCTTGCA GTTCGCAGAT CTGGTGACCG ATCCGCTCCA CTTCCGTGCG ATTTGCAGCA TGGTGCAAGA CTGCGCGGCT CAAGAAGCGG GGACGGCGAA GAAAAAGCGC AAGAGCGAAA TGGATGAGGC CATGAGCATG TGGGAGCACG AGCGACCGGA GGTCGAGGCC CGATTCCATA GGCTCACTCC GCACGAAAAG AGCATGGTGC TTTCGGCAGC GCGCTCGTTC CTCATGGACA CCGCGACCGA ACAGAAGCTG GAGAAGTTGG AGACCATCAC GAAAGGCCTC AAGATCGTCG TCAATGAGTT GGCGACGAAC CCTCGCCTGC GACAGGTATT CAAGACAGAC GAGCTCCCGC CGTTTGACTT TCAGGGCTTT CTCGCGGCAG GCAAAGAACA ACCTGGGCGT TTGGTCGTGG TCGTGACGGG GAACCGTCCG GCCGGCAAAC TCTTCGGCAA GCTGTTCCTG GTCACCCTCA AGATGTACGC GCTCGAACGC GAAGGCACGG AAGATACGCG CCGACCCGTG TATCTCTACG TCGACGAATT CGCCGTCTAC GGCACCGAGT CGTTCACCGA GATGTTCTCC CAAGCGCGCA AGTACCGCGT CGGTATGATG CTCGCCATTC AAGCGCGAGC GCAGCTCCTT GATGTCAGCA AGAAGTTCAT GGACGTCGTG GAGGGGAGCT GTCGCAACAA AATCTACTTC CCGGCCCCGT CTCCGGATGA TGCGCGCTTC TTGGAGCACG CGCTGGGATC CGTGAAGAAC ATTCGCGAAA CCTATTCAGA AAACAAGCTC AGCTGGTTCT TTGACACCCG CAACTTGGAC CGGCGCGTGA GCACCCAGGA GACCATCGAC CCGCGGTATC GCTTGGAGGA CATCTCCTAC GGGCTTTCCA AGGACGAGGC GATTTTCGCC ATGACCGTGG ACAATCAGGT GCAGGCGCCC TGTGTCGGCA TCACGTCGTA CGCAGATGAA TGGGTGAAAA AGCAACGCGG ATTCTTCGAC GTGCGCCGTT CGCAGAACAG ATCGCAACGA CAGCCGACGC CTATCAACGT AGCGGTAAAA GTCGTCGAAC ATGGGGTATC AGAAAGGCGG TCTATGCCGG AACCTCGTGA CGAAACCTAT GTCCCAAGTC CTGCATCGCC GTCGAAGGTA CGACCCACGG CAGATCGGAA CGCGAAAATC AATGTTCAAG CCTTCGCGCG CGCGATCCAA GAGGCGGCTT TCCATATGTC CGATGCGTCG CGCGCCGATA CCGTAGATGT CGAGCCAGTC GAAACTCACA CGGAGACATC GCCCCAACAG GGGGAAACAA GCCCATATGC GTCGCCGAAT GAGTCGACAG CGCAAGAGGC CGAGAGACCC ATAGAAGAGC CAGCCATTGT CCGTATCGAC TTACGGCCTC AGCGACCGCC GAAACGTTGC CCACAGTGCG AAGCAGAACT GACCTTGACG CCGGATGAGC GCAAATGGCG GTGTCCGCGG TGCGGGTTTG AACGGAAGAA TCGATGA
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Protein sequence | MPEVPALVRV SIAHSTWFMV VIGAIGAFAL YRSVFRALGR MAQLGTLAVI AMAGFGVVKL HGLIAAWQNR MLHPSTPKAA TTATNSHAII NPLTSGTGPK LPLSALNATN PLVHENAWVI ALALVAGVLG LLAFFVYRGL SPTAKAQFLQ RMQATDFDRS THRRDDDPNK FSLVGVEVGI RKDNGRPIRI EGKDRFINTL VLGSTGTGKT SRIMLKAVYQ DLRSMANGTP MDVIAMDPDG GFAQAAVNMA NQLGVETIIM DLRGTMPSTV SFSPFGGEIA DIIDNVRAAL QEKMGKQDGF FQNAQDDLVR TVIQVQVPLW PEADFLQFAD LVTDPLHFRA ICSMVQDCAA QEAGTAKKKR KSEMDEAMSM WEHERPEVEA RFHRLTPHEK SMVLSAARSF LMDTATEQKL EKLETITKGL KIVVNELATN PRLRQVFKTD ELPPFDFQGF LAAGKEQPGR LVVVVTGNRP AGKLFGKLFL VTLKMYALER EGTEDTRRPV YLYVDEFAVY GTESFTEMFS QARKYRVGMM LAIQARAQLL DVSKKFMDVV EGSCRNKIYF PAPSPDDARF LEHALGSVKN IRETYSENKL SWFFDTRNLD RRVSTQETID PRYRLEDISY GLSKDEAIFA MTVDNQVQAP CVGITSYADE WVKKQRGFFD VRRSQNRSQR QPTPINVAVK VVEHGVSERR SMPEPRDETY VPSPASPSKV RPTADRNAKI NVQAFARAIQ EAAFHMSDAS RADTVDVEPV ETHTETSPQQ GETSPYASPN ESTAQEAERP IEEPAIVRID LRPQRPPKRC PQCEAELTLT PDERKWRCPR CGFERKNR
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