| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_2998 |
|---|
| Symbol | |
|---|
| ID | 8417508 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013206 |
|---|
| Strand | - |
|---|
| Start bp | 41381 |
|---|
| End bp | 42190 |
|---|
| Gene Length | 810 bp |
|---|
| Protein Length | 269 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 645029124 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003186390 |
|---|
| Protein GI | 257792991 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01784] conserved hypothetical protein (putative transposase or invertase) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.00377147 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGGTTC AGGATACGTT AATGAAGGCC CTCACCCGCT CCTTATCCGG CGGCGCTCTC
GATGTATTGG GCGTGCACGG TGTGGACCTG GTGGAGCCTT TTGCAACCGA ACTTCCCGCC
AACACGCTGC GCATGGATCG TGTGTGGCGG ACGGTCGACG GAAACCTGTT TCACTTGGAG
TTTCAGACGA AGCGCGAGTC GACGTTGCAT CGCTTTTTGG AATACGACGC ACGCTTGGCG
AACGAACACC GGACGAGGAT TCGCACGGTT GTCTTGTACC ACGCGAGTGT CGCGAGCGCG
CCAGATGAGC TCGACATCGG GACAGCACTC TACCGCGTCG AGAATGTATT TCTGCGACAC
CTCGACGGTG ACCAAGCGCT GAATGAAGTC GAGCATCACC TGCGTGCTGG ACAGTGGGAG
CCTGGCGACC GGATGCGATT AGGCCTAGCC CTCAACATGC GCTTGGAGAA TCAGGCGCAT
GCGTTCGAGC GAGTGCGTGA ACTCATTCCT CAAGTGCCGG ATGAGACCGA ACGGGATTTG
GTCGTGAGTG CGATTCTCGT GCTTGGCGAT CAGGGTCTCA CCGAGGAACA ACGGGCACTA
CTTCGAAAGG AGCTGAGAAA CGTGTCGAAG CTGGCGGAAG AGCTGTACGA GGAAGGTCGC
GAGGAAGGTC GCATGGTGGG GCGTATGGAA GAACGCATGG AAATCGCTCT GAACATGCTT
CGTAAAGGCA TGTCTGTTGA AGACATCTCG GATACCACGG GGCTAACTAA GCAAGAGATC
GAAGAACTTG CGCGGAAACA ATCGCATTAA
|
|---|
| Protein sequence | MPVQDTLMKA LTRSLSGGAL DVLGVHGVDL VEPFATELPA NTLRMDRVWR TVDGNLFHLE
FQTKRESTLH RFLEYDARLA NEHRTRIRTV VLYHASVASA PDELDIGTAL YRVENVFLRH
LDGDQALNEV EHHLRAGQWE PGDRMRLGLA LNMRLENQAH AFERVRELIP QVPDETERDL
VVSAILVLGD QGLTEEQRAL LRKELRNVSK LAEELYEEGR EEGRMVGRME ERMEIALNML
RKGMSVEDIS DTTGLTKQEI EELARKQSH
|
|---|
| |