| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_2995 |
|---|
| Symbol | |
|---|
| ID | 8417505 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013206 |
|---|
| Strand | - |
|---|
| Start bp | 38675 |
|---|
| End bp | 39646 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 645029121 |
|---|
| Product | integrase family protein |
|---|
| Protein accession | YP_003186387 |
|---|
| Protein GI | 257792988 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4974] Site-specific recombinase XerD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.941848 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGAAA TCATGGATAC TAACGTATCC TCCACGATAC ACGTTGGATT GACCGAGTTA
TCTGCAAGCG CCAACAAGTA TGTTCTGAAC TCTAAAGCAC GAAATACGAT TCGGGCCTAC
CAATCCGACT GGCGCTCGTT CTGCACCTGG TGCGACGAAC GCCACCTCTC TTCCCTGCCC
GCCGAGCCGA AGACGGTAGC GCTCTACCTA TCCGACATGG CTGATCGAGG CTATCGAACC
AGTACCATCG GTCGGCATAT GATTTCGATT GGCCTCGCTC ATCGAACGAA AGGCTTCCCC
TCCCCCACCT CCGATGAGAC GGTACGGGCC GTCTGGCGGG GCATCCGCAA TACGCTTGGC
GTAGCACCTC AGGGGAAATC ACCTATATTA GTGGAAGACT TGCGACGCAT GTTGCAACAC
GTGCCAAACG ACCTCATGGG CCTGCGGGAC CGCGCACTTC TGCTGATCGG GTTCGCCGGC
GCATTCCGAC GCTCGGAAAT CGTGGCTCTG AATGTTGAGG ACGTCGAGTT CGTGCGTGAG
GGGCTTGTGA TCACGTTGCG CAGGAGCAAG ACTGACCAGG AGGGCGAAGG TCGGAAAGTG
GGTATCCCCT ACGGCTCGTT CATCGAGACC TGCCCAGTGC GCGCGCTCCA AGCGTGGTTG
AACGCGACGG GGATTGATTC CGGGCCCCTC TTTCGCCGAG TGACCAAAGG CCACGATGTG
CGCGACGCGC GACTCTCTGA TAAGACCGTG GCACGTATCG TAAAGCGGTA TGTGCGTCTA
ATAGGCCTTG ACCAGCGTCA CTTTGCCGGC CACAGCCTGC GCGCAGGTCT TGCAACATCG
GCGGCGCTGG CGGGTGTGTC GGAACGAGAC ATTATGGCGC AGACGGGTCA TAGAAGCCCA
ATGATGGTGC GGAGGTATAT CCGAGACAGC AACTTGTTCA GGTCAAATGC GGCGGCTAGG
ATTGGATTAT GA
|
|---|
| Protein sequence | MQEIMDTNVS STIHVGLTEL SASANKYVLN SKARNTIRAY QSDWRSFCTW CDERHLSSLP
AEPKTVALYL SDMADRGYRT STIGRHMISI GLAHRTKGFP SPTSDETVRA VWRGIRNTLG
VAPQGKSPIL VEDLRRMLQH VPNDLMGLRD RALLLIGFAG AFRRSEIVAL NVEDVEFVRE
GLVITLRRSK TDQEGEGRKV GIPYGSFIET CPVRALQAWL NATGIDSGPL FRRVTKGHDV
RDARLSDKTV ARIVKRYVRL IGLDQRHFAG HSLRAGLATS AALAGVSERD IMAQTGHRSP
MMVRRYIRDS NLFRSNAAAR IGL
|
|---|
| |