Gene Aaci_2965 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_2965 
Symbol 
ID8417475 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013206 
Strand- 
Start bp10382 
End bp11089 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content59% 
IMG OID645029091 
ProductSAF domain protein 
Protein accessionYP_003186357 
Protein GI257792958 
COG category 
COG ID 
TIGRFAM ID[TIGR03177] Flp pilus assembly protein CpaB 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTCTT GGGTGAGATA CACCCTTGCG ACCACGCTGT TCGTGGTCGG CGTCGGGGGG 
AGCATCGCGT ACAACCAGTT CGTGTCCCCG ATGCTTACGA GTGAATGGGT GTACGTCGCG 
CGCACGCAGC TGCCTGCGGA TACTCCCATT CAAGCGTCAG ATGTCGAGCG TATCCGCGTA 
CCGAAAAGCG AGGTAAGTCC CGACGCAATT ACGAACGCGG AAGGGCTTAT GGGCACATAC 
ACGGCGCAAC CGGTCGACCA GAATCAGGTG TTGACCGCGC TTGATACCGA GCCCGATCCC 
TTCACGATTA CCCCCGGCAC GGAGGATGTG CCGATTCCTT CAACTTGGAT TGCGTCGGTG 
TCGGAGACGC TTCGCCAAGG GGATTACGTT GATCTGATTC CCATTGCCGA GCCGCAAGCG 
GGAAGTAACA ACGTAGGGAT GTTGACCACA ACCAGCGAGG CCTCCGAATT CAAACATCTC 
CTCGTGTTAT CGGTACACAC CGATAACAAC GCCGAGGTGA CGTCGCAACA GACGGGGGCG 
CCGCAATCGG TGGGGGCACG TGGGAACGGA AGCGGTGTGC CTGCGAGCGT CGATGTCAAG 
ATGACATCCG CGGAAGCGCA GGCCTTGGCG AGTTTGATCC AGCAGAAGTA TCAGCTGCTC 
ATCGTGGGCG TGTCGGACGA CAACCGGACG GGAGGTGGGG CGAAGTGA
 
Protein sequence
MKSWVRYTLA TTLFVVGVGG SIAYNQFVSP MLTSEWVYVA RTQLPADTPI QASDVERIRV 
PKSEVSPDAI TNAEGLMGTY TAQPVDQNQV LTALDTEPDP FTITPGTEDV PIPSTWIASV 
SETLRQGDYV DLIPIAEPQA GSNNVGMLTT TSEASEFKHL LVLSVHTDNN AEVTSQQTGA 
PQSVGARGNG SGVPASVDVK MTSAEAQALA SLIQQKYQLL IVGVSDDNRT GGGAK