Gene Aaci_R0010 details

Gene Information

• Locus tag: Aaci_R0010
• ID: 8423677
• Type: rRNA
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446
• Kingdom: Bacteria
• Replicon accession: NC_013205
• Strand: +
• Start bp: 227569
• End bp: 230512
• Gene Length: 2944 bp
• GC content: 60%
• IMG OID: 645026320
• Product: 23S ribosomal RNA

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.142358
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TGAAGCTAGG AAGGGCACAC GGTGGATGCC TAGGCGCCAA GAGCCGAAGA AGGACGGGGC 
GAACGCCGAT ATGCCACGGG GAGCCGTAAG CGGGCTTGGA TCCGTGGATG TCCGAATGGG 
GGAACCCGCT GGCGGGAAGC GCCAGCAGCT TGAGGCCGAA AGGCTTCGAG CGGGGAACCG 
GGGGAAGTGA AACATCTCAG TACCCCGAGG AAGAGAAAGC AAACGCGATT CCGTGAGTAG 
TGGCGAGCGA AAGCGGAGGA GCCTAAACCG CATGCGTGGG AAAGGCTGCA GCCGTTGCGC 
ATGCGGGGTT GTGGGGCTGT TTGCGGCGAG CTGCAGGGTA GCCAGCCCGA GTGGGTGCGT 
AGGAGAACGG TCTGGGAAGG CCGGCCAGAG ACGGTGAGAG CCCGGTATCC GAAACGCGCG 
CACGAGGGTG GAAACAGACC CCGAGTACTG CGGGACACGA GGAATCCCGT AGGAATCCGG 
GAGGACCACC TCCTAAGGCT AAATACTCCT TGGCGACCGA TAGTGAACGA GTACCGTGAG 
GGAAAGGTGA AAAGCACCGC GGGAGCGGAG TGAAAGAGAA CCTGAAACCG TGTGCCTACA 
AGCAGTCGGA GCACCGATGG GTGTGACGGC GTGCCTTTTG TAGAATGAAC CGGCGAGTGA 
TGCGGGCGAG CGAGGTGAAG GCGGAGGAGC CAGAGCCGAA GCGAAAGCGA GTCTGAAGAG 
GGCGTGAGTT CGTCCGCATC GACCCGAAAC CGGGTGATCT ACCCCTGGTC AGGGTGAAGT 
GCGGGTAACA CCGCATGGAG GCCCGAACCC ACTGGCGTTG AAAAGCCAGG GGATGAACTG 
GGGGTAGGGG TGAAATGCCA ATCGAACCCG GTGATAGCTG GTTCTCCCCG AAATAGCTTG 
AGGGCTAGCG TCAGGGGATG AGTTGTGGAG GTAGAGCGCT GATGGGGTGC GGGGCCCGCG 
AGGGCTACCA AGCTTCGTCA AACTGCGAAT GCCACAATGT CGAGGAACCT GGCAGTGAGA 
CTGCGAGCGA TAAGGTCCGT AGTCGAGAGG GAAACAGCCC AGACCCGCAG CTAAGGTCCC 
GAAGTTCCGG TTGAGTGGGG AACGATGTGG CGCTGCGAAG ACAACCAGGA TGTTGGCTTA 
GAAGCAGCCA TCATTGAAAG AGTGCGTAAT AGCTCACTGG TCGAGTGGCG CTGCGCGGAA 
AATGGAACGG GGCTAAACCG GACACCGAAG CTCGGGATGG CGACATGGTA GGGGAGCGTT 
CCATGTGCGG GGAAGCTGAG CCGGGAGGCT TGGTGGAGCG CATGGAAGTG AGAATGCCGG 
TATGAGTAGC GAAAAGAGGG GTGAGAATCC CCTCCGCCGA AAGCCCAAGG TTTCCTGGGG 
AAGGCTCGTC CGCCCAGGGT CAGTCGGGAC CTAAGGTGAG GCCGAAAGGC GTAGCCGAAG 
GAGAACAGGT TGACATTCCT GTACCACCGT AGGCGTTTGA GCGAAGGGGT GACGCAGGAG 
GACGAGGGAA GCGGCCGGAT GGAAGGGGCC GTCCAAGCAG CGAGCGTGGG GTGTAGTGAA 
ATGCGCACCC CGAGAAGCGT GAGCTGTGAT GGGGAGGGAA GAAAAGTACC GAAGTCCCGA 
CGTTCACACT GCCGAGAAAA GCCTCTAGCG AGCCGAAGGT GCCCGTACCG GAAACCGACA 
CAGGTGGGCG CGTGGAGAAC ACGAAGGCGC GCGGGAGAAC TCTCGTTAAG GAACTCGGCA 
AAATGGCCCC GTAACTTCGG GAGAAGGGGC GCTCTTCCGT GGGGAAGAGC CGCAGTGAAA 
AGGCCCAAGC GACTGTTTAG CAAAAACACA GGTCTCTGCG AAGCCGAAAG GCGACGTATA 
GGGGCTGACG CCTGCCCGGT GCTGGAAGGT TAAGAGGAGG GCTTAGGGGG GAACCCCGAA 
GGTCCGAATC GAAGCCCCAG TAAACGGCGG CCGTAACTAT AACGGTCCTA AGGTAGCGAA 
ATTCCTTGTC GGGTAAGTTC CGACCCGCAC GAAAGGCGTA ACGACTTGGG CGCTGTCTCA 
ACGAGAGACC CGGTGAAATT GTAGTACCTG TGAAGATGCA GGTTACCCGC GGTTAGACGG 
AAAGACCCCG TGGAGCTTGA CTGTAGCCTG ATATGGGACA ACGGTGTTCC ATGTACAGGA 
TAGGTGGGAG ACGGAGAAGC TTGGGCGCCA GCCTGAGTGG AGTCGGCGTT GGGATACCAC 
CCTTGGGACA CGGTTGTTCT AACCGGCCTT GTGAGGACGC GAGGCGGGAC AGTGTCAGGC 
GGACAGTTTG ACTGGGGCGG TCGCCTCCTA AAGGGTAACG GAGGCGCCCA AAGGTTCCCT 
CAGCGCGGAT GGAAATCGCG CGGAGCGTGC AAAGGCAAAA GGGAGCTTGA CTGCGAGACG 
GACAGGTCGA GCAGGGACGA AAGTCGGGCT TAGTGACCCG GTGGTTCCGA GTGGAAGGGC 
CATCGCTCAA CGGATAAAAG CTACCCCGGG GATAACAGGC TGATCTCCCC CAAGAGTTCA 
CATCGACGGG GAGGTTTGGC ACCTCGATGT CGGCTCATCG CATCCTGGGG CTGAAGTCGG 
TCCCAAGGGT TGGGCTGTTC GCCCATTAAA GCGGTACGCG AGCTGGGTTC AGAACGTCGT 
GAGACAGTTC GGTCCCTATC TGCCGCGGGC GTAGGATACG TGAGAGGGGT TGTCCCTAGT 
ACGAGAGGAC CGGGATGAAC CGACCGCTGG TGTACCAGTT GTCCCGCCAG GGGCACCGCT 
GGGTAGCCAA GTCGGGAAGG GATAAGCGCT GAAAGCATCT AAGCGCGAAG CCCGCCTCAA 
GATGACGTAT CCCATTCCGT GAAGGAAGTA AGACCCCTCG AAGACGACGA GGTGGATCGG 
TCTGGCGTGG AAGCGCAGTG ATGCGTGGAG CGGACAGATA CGAATCGGTC GAGGGCCTCA 
CCTG 

 

Protein sequence