| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_R0001 |
|---|
| Symbol | |
|---|
| ID | 8423469 |
|---|
| Type | rRNA |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013205 |
|---|
| Strand | + |
|---|
| Start bp | 10789 |
|---|
| End bp | 12313 |
|---|
| Gene Length | 1525 bp |
|---|
| Protein Length | |
|---|
| Translation table | |
|---|
| GC content | 60% |
|---|
| IMG OID | 645026114 |
|---|
| Product | 16S ribosomal RNA |
|---|
| Protein accession | |
|---|
| Protein GI | |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00000360064 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | AGAGTTTGAT CCTGGCTCAG GACGAACGCT GGCGGCGTGC CTAATACATG CAAGTCGAGC
GGACCTCTTC GGAGGTCAGC GGCGGACGGG TGAGGAACAC GTGGGTAATC TGCCTTTCAG
ACCGGAATAA CGCCCGGAAA CGGGCGCTAA TGCCGGATAC GCCGCGAGGA GGCATCTTCT
TGCGGGGAAA GGCCCGATTG GGCCGCTGAG AGAGGAGCCC GCGGCGCATT AGCTCGTTGG
TGGGGTAACG GCCCACCAAG GCGACGATGC GTAGCCGACC TGAGAGGGTG ACCGGCCACA
CTGGGACTGA GACACGGCCC AGACTCCTAC GGGAGGCAGC AGTAGGGAAT CTTCCGCAAT
GGGCGCAAGC CTGACGGAGC AACGCCGCGT GAGCGAAGAA GGCCTTCGGG TTGTAAAGCT
CTGTTGCTCG GGGAGAGCGG CATGGGGAGT GGAAAGCCCC ATGCGAGACG GTACCGAGTG
AGGAAGCCCC GGCTAACTAC GTGCCAGCAG CCGCGGTAAA ACGTAGGGGG CGAGCGTTGT
CCGGAATCAC TGGGCGTAAA GGGTGCGTAG GCGGTCGAGC AAGTCTGGAG TGAAAGTCCA
TGGCTCAACC ATGGGATGGC TCTGGAAACT GCTTGACTTG AGTGCTGGAG AGGCAAGGGG
AATTCCACGT GTAGCGGTGA AATGCGTAGA GATGTGGAGG AATACCTGTG GCGAAGGCGC
CTTGCTGGAC AGTGACTGAC GCTGAGGCAC GAAAGCGTGG GGAGCAAACA GGATTAGATA
CCCTGGTAGT CCACGCCGTA AACGATGAGT GCTAGGTGTT GGGGGGACAC ACCCCAGTGC
CGAAGGAAAC CCAATAAGCA CTCCGCCTGG GGAGTACGGT CGCAAGACTG AAACTCAAAG
GAATTGACGG GGGCCCGCAC AAGCAGTGGA GCATGTGGTT TAATTCGAAG CAACGCGAAG
AACCTTACCA GGGCTTGACA TCCCTCTGAC CGGTGCAGAG ATGCACCTTC CCTTCGGGGC
AGAGGAGACA GGTGGTGCAT GGTTGTCGTC AGCTCGTGTC GTGAGATGTT GGGTTCAGTC
CCGCAACGAG CGCAACCCTT GACCTGTGTT ACCAGCGCGT TGAGGCGGGG ACTCACAGGT
GACTGTCGGC GTAAGTCGGA GGAAGGCGGG GATGACGTCA AATCATCATG CCCCTGATGT
CCTGGGCTAC ACACGTGCTA CAATGGGCGG TACAAAGGGA GGCGAAGCCG CGAGGCGGAG
CGAAACCCAA AAAGCCGCTC GTAGTTCGGA TTGCAGGCTG CAACTCGCCT GCATGAAGCC
GGAATTGCTA GTAATCGCGG ATCAGCATGC CGCGGTGAAT ACGTTCCCGG GCCTTGTACA
CACCGCCCGT CACACCACGA GAGTCGGCAA CACCCGAAGT CGGTGAGGTA ACCCCGAAAG
GGGAGCCAGC CGCCGAAGGT GGGGTCGATG ATTGGGGTGA AGTCGTAACA AGGTAGCCGT
ACCGGAAGGT GCGGCTGGAT CACCT
|
|---|
| Protein sequence | |
|---|
| |