Gene Aaci_2939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_2939 
Symbol 
ID8426480 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp3008165 
End bp3008869 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content58% 
IMG OID645029065 
Productprotein of unknown function DUF554 
Protein accessionYP_003186331 
Protein GI258512897 
COG category[R] General function prediction only 
COG ID[COG1811] Uncharacterized membrane protein, possible Na+ channel or pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTCTTA TCGGTACGAT TGTCGACGTC GTCGCCATTT TGTTGGGGAC AGCCATTGGC 
TACTTTTTGC CGCGCATTCC GGACCGCATG CGCGAGACCG TAACGGTCGG CGTGGCGCTG
TGCGTCATAG CCATTGGACT CAGCATGGCG CTCAGCGACA TGAATGATAT TGTTCTGATC
ATCTTCTCCG TCGTGATGGG CGCGGTGACA GGCGAACTTC TCAAAATCGA GGCGCGGTTT
GAGCGCCTGG CCCATCGGTT GGAAGAGCGA TTTCGCCGGC TGTACCGAGG TCCGATCGCG
CAGGGCTTTA TTTCCGCAAC GCTTTTGTTC TGTGTCGGCT CGATGTCCAT CGTGGGCGCG
GTGCAGGACG GGTTGCAGGG CGATCACAAG ACGCTCTTTG CAAAGTCCGT GCTTGATGGA
TTCTCCGCAG TGGTGCTGAC CTCCACGTTG GGTCCAGGCG TCGGGCTTGC CGCGATACCG
GTTCTGGTGT ACCAAGGTCT CATCGCACTC ATCTCGAATC TGTTCGGAAG CTTCTTGGAC
ACGCCACTGG TCATTGAACC GATCACCGCT GCAGGGGGTC TTCTGATTGT CGCCATCGGA
ATCCAGCTCG CGGGGCTGCG CAGAATCTCG GTTCCAAACC TGCTGCCCGC CATCGTCATT
GCGCCCATGG TCAAGGTGGT GATTCACGCC ATCTCGCACA TGTGA
 
Protein sequence
MFLIGTIVDV VAILLGTAIG YFLPRIPDRM RETVTVGVAL CVIAIGLSMA LSDMNDIVLI 
IFSVVMGAVT GELLKIEARF ERLAHRLEER FRRLYRGPIA QGFISATLLF CVGSMSIVGA
VQDGLQGDHK TLFAKSVLDG FSAVVLTSTL GPGVGLAAIP VLVYQGLIAL ISNLFGSFLD
TPLVIEPITA AGGLLIVAIG IQLAGLRRIS VPNLLPAIVI APMVKVVIHA ISHM