| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_2935 |
|---|
| Symbol | |
|---|
| ID | 8426476 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013205 |
|---|
| Strand | - |
|---|
| Start bp | 3005318 |
|---|
| End bp | 3006166 |
|---|
| Gene Length | 849 bp |
|---|
| Protein Length | 282 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 645029061 |
|---|
| Product | MscS Mechanosensitive ion channel |
|---|
| Protein accession | YP_003186327 |
|---|
| Protein GI | 258512893 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0668] Small-conductance mechanosensitive channel |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.863949 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACGCTTT GGGCGGACAT TCGACAAAAG GCGCTTTCGG ACATCCCGAG TCTCGAGGTG
GTGATTTGGG ACGCCATCCG GATCGCCATC TTCTTCGCCC TGGCGCAATT CCTGATACGC
GTCGGTGTTC GCATCACGCG GCGCATGTTG TCTCTTCACG CCAGGATGGA CGAGCGCCGA
CGAAAGACGC TTGAATCGCT GTTCACGAAC GTCATCCGGT ACACGGTATA CTTTGTGTTG
GTGGTCGAAA TTCTGTCGCT CTTCCACGTC AACGTGTCCG CCATCCTTGC GAGCGCGGGC
ATTGTCGGCG TAGCCGTCGG ATTTGGAGCG CAGAGCTTGG TGAAAGACCT GATTTCGGGT
CTTTTCATCC TGTTCGAAGA CCAGTATGGC GTCGGAGACA TCGTGCAGAT CAACGGGTTC
AAGGGCATGG TGATTTCCAT CGGCATCCGT CTCACCAGGA TCCAGGCGTG GACAGGCGAG
GTTCAGGTCA TTCCCAACGG TCAGATCACA AGCGTGACCA ACTACTCGCG CACGCATTCC
ACGGCCGTGA TCGACGTCAC CGTTCCCTAC GATGTGGACG TGGATCTCGT GAAATCCATC
ATGCAACGCG TGCTGCTCAG GCTCCAAGAG GAGCGCTCGG ACGTGGTGAC GGGGCCGGTT
CAGGTCCTCG GCGTGCAGGA TGTCTCCAAC ACGAATCTCG TCATCCGGGC CACCGCGGTG
TGTGCCCCCA CCAAAAACGG CGAGATTGAG CGCGAGGCGC ACGAGCGCAT CAAGGAGGAA
TTGGACCGCG CGCTCCACGA GAATGAGGAC GCGCAAGGAA CAACGGGCGG CGAGCTTGCT
GTAGAGTAA
|
|---|
| Protein sequence | MTLWADIRQK ALSDIPSLEV VIWDAIRIAI FFALAQFLIR VGVRITRRML SLHARMDERR
RKTLESLFTN VIRYTVYFVL VVEILSLFHV NVSAILASAG IVGVAVGFGA QSLVKDLISG
LFILFEDQYG VGDIVQINGF KGMVISIGIR LTRIQAWTGE VQVIPNGQIT SVTNYSRTHS
TAVIDVTVPY DVDVDLVKSI MQRVLLRLQE ERSDVVTGPV QVLGVQDVSN TNLVIRATAV
CAPTKNGEIE REAHERIKEE LDRALHENED AQGTTGGELA VE
|
|---|
| |