Gene Aaci_2902 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_2902 
Symbol 
ID8426443 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand- 
Start bp2971975 
End bp2973024 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content56% 
IMG OID645029029 
Productperiplasmic binding protein/LacI transcriptional regulator 
Protein accessionYP_003186295 
Protein GI258512861 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1879] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACGGT TCAACTGGAA ATCGGGAAAG AAATACGCGG CGGTTGCGGC AGCTGCTGCG 
TCGATCGTCT TGGCTGCGAC GGGTTGCTCG ACAGGCGGCG GAAACTCGTC CACTTCGTCC 
GGTTCGACGG GTGGCAGCTC CTCAGCGTTC CAGGGTTCAT CGAGCGAAAC GTACTACATG 
GTGACGTTCT TGTCAGGTAT CGAGTACTGG AAGGGATGCT TCGCCGGCAT GCAGGCAGCC 
GCCAAAGACC TTGGCGTGAA GGCGGTATTT ACTGGAGCTC CTCAGTATGA TATCAACCAA 
GAAGTTACGA CCATGCAACA GGTCATCGCG AAACATCCCG CGGGTATTCT GGTAACGTCT 
ATCAACGCTC AGGCTATGAC GCCTGTCATC AACCAAGCCA TTGCGGCAGG TATTCCTGTC 
ATTAGCTTCG ACTCGGACGC GCCTCAAAGC AAGCGGTACG CGTACCTCGG AACCAGCAAC 
ATCGAAGCGG GGCAGAAGGC CGCGGATTAT CTGGGACAAG CTCTCGGTGG TCACGGCGAA 
GTGGCAGTCA TCACCACGCC GGGAGAGCTG AACTTGGACC AACGCGTACA GGGCTTCAAA 
GACGAAATGG CCGCGAAGTA TCCGGGGGTC AAAGTCGTCG CCGTCCAGAA CGGCAACTCT 
GATCAAATCA AAACCGCTCA AGTCACGTCT GCGTTGCTGC AGACCTATCC AAATCTTGCG 
GGTATCTTCT GCACCGAGGC CGACGAAGGT ACCGGCGCTG CGACCGCCGT GCAGGAGGCA 
GGAAAGACAG GCACGGTGAA GATTGTCTCG TTCGATACAG ACAAGGCGAC GCTGAACGCG 
ATCAAGAGCG GACAAATCAC TGCCACTGTC GCGCAGGGCA CATGGAACAT GGGCTTCTGG 
GGCCTCATGG ATTTGTTTGC GATTCATCAC AACCTTGTGC ATCCTGTCGC CAATTGGCAG 
CAGTCCGGTG TTGATCCCGT ACCGCCTGAA GTGGATACTG GCGTGACGAT CGTGACGAAG 
AGCAACGTGA ATGCGTACTT GCAACAATAA
 
Protein sequence
MKRFNWKSGK KYAAVAAAAA SIVLAATGCS TGGGNSSTSS GSTGGSSSAF QGSSSETYYM 
VTFLSGIEYW KGCFAGMQAA AKDLGVKAVF TGAPQYDINQ EVTTMQQVIA KHPAGILVTS 
INAQAMTPVI NQAIAAGIPV ISFDSDAPQS KRYAYLGTSN IEAGQKAADY LGQALGGHGE 
VAVITTPGEL NLDQRVQGFK DEMAAKYPGV KVVAVQNGNS DQIKTAQVTS ALLQTYPNLA 
GIFCTEADEG TGAATAVQEA GKTGTVKIVS FDTDKATLNA IKSGQITATV AQGTWNMGFW 
GLMDLFAIHH NLVHPVANWQ QSGVDPVPPE VDTGVTIVTK SNVNAYLQQ