Gene Aaci_2872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_2872 
Symbol 
ID8426413 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand- 
Start bp2932058 
End bp2933023 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content51% 
IMG OID645028999 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003186265 
Protein GI258512831 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCACCG TCATGGAGAT GAGAAGGTCT CACGGCCGGG AGCGCGCAAA GCGGCGCGTG 
GATTGGGTCG CCTACGGGTA CCTCTCTCCA GCGCTCGTCA CCATCTGTGT TCTCAGCATC 
CTACCCATTT TTTACACTAT ATACATCTCG TTTACTAATT TTAATCAAAT GCACTTTCTT 
TCTTATCAGT TCGTAGGTTT GAAGAACTAT GAGGAACTTT TAAATCCGCA TGATCCGTTG 
TCGAATCTAT TTTTGCCGAC ATTCATCTGG ACCTTGGTGT ACGCGCTCTG TACCACGGCG 
CTCGCGTATC TCGTGGGATT GTTCCTCGCC GTCCTACTCA ATAACAAACA CATGCGGGAG 
CGCACTCTCT ATCGAACACT GCTCATCGTG CCTTGGGCGG TTCCGAACCT CATTTCAATG 
CTCGCATGGC AGGGCCTGTT GAACGATCAG TACGGGCAAA TCAATGCACT TTTGCATGGC 
GTGTTTGGCC TGCCGCGCAT TCCCTGGCTC ACGAGCGCGT TATGGGCTCG AATCGCTGTC 
ATCATGGTCA ATGTTTGGGC CGGTTTTCCC TACATGATGA CCGTTTGTTT AGGTGCTCTG 
CAGTCGATCC CGACCGACCA ATATGAGGCC GCGGAAATTG ACGGAGCCAA CTGGTGGCAA 
GTGTTTCGGT ATGTGACCAT GCCTTCGGTG TGGCGAATCT CTTTGCCGCT CCTGATACCG 
TCTTTTTCAT ACAACTTTAA CAACTTCAAC GCATCGTATC TGTTGACTGG AGGCGGACCG 
CCCAATTCGA ACAACCCATT CCTGGGTCAA ACGGACATTT TGGCAACTGC GGCCTACAAA 
ATGACTCTTA CGTTCAATCG CTACGACTTA GGAGCGACGA TTTCCGTTCT GCTGTTCATT 
CTTGTGGCTC TTATCAGCTG GGTGCAGATG CGCTATACCG GAGCCTTTAA GGAGGTCGAT 
GCGTGA
 
Protein sequence
MATVMEMRRS HGRERAKRRV DWVAYGYLSP ALVTICVLSI LPIFYTIYIS FTNFNQMHFL 
SYQFVGLKNY EELLNPHDPL SNLFLPTFIW TLVYALCTTA LAYLVGLFLA VLLNNKHMRE 
RTLYRTLLIV PWAVPNLISM LAWQGLLNDQ YGQINALLHG VFGLPRIPWL TSALWARIAV 
IMVNVWAGFP YMMTVCLGAL QSIPTDQYEA AEIDGANWWQ VFRYVTMPSV WRISLPLLIP 
SFSYNFNNFN ASYLLTGGGP PNSNNPFLGQ TDILATAAYK MTLTFNRYDL GATISVLLFI 
LVALISWVQM RYTGAFKEVD A