Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aaci_2819 |
Symbol | |
ID | 8426360 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
Kingdom | Bacteria |
Replicon accession | NC_013205 |
Strand | + |
Start bp | 2878254 |
End bp | 2879261 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 645028946 |
Product | Phytoene synthase |
Protein accession | YP_003186212 |
Protein GI | 258512778 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1562] Phytoene/squalene synthetase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGGATGAAC GGGTCCTTCG CTTTGTGGTG GAAGAGGGGC GCCGCGCCGC CCATGAGCTG TCCGCTTCCC CCGCTTCACG CTGGACGCGC CTAGGGGATC TACCCCGCGT CGGACATATC ATCCGCCAAC ACAGCAAGAC GTTCAGTCTT GCCGCGCGGT GTCTTCCCAG GCGCTCGCGC AAGGCGGTGG AAGCCTTCTA CGCCTTCTGC CGATCCGCCG ACGACTTCGC CGACCACCTC GGTGAAGAGG GCAAGCGACG CCTGGAAGCC TATCTCGCGG CCATTCGCGG CGGCGCGCCC GCACCGGACC CCATCCTGGC CAGTTGGCTC GCCATCGGCG ATGGCATGCG TATTCCGCGC CGGTGGAGCG AGTCGCTTGT CGAGACGCTT TTGGCAGATA CCCAGCGCTC CGTGGTCCCC ACGCTGGAGG ACCTGCTTGG GTACGCGTAC GGTGTCGCGT CCACCGTCGG CCTCATCACG ACGGTCATCG TCGGCTATCG GCGAACGAGT TCTCTCGAGG ACGTCTTCGC GCGCGCCATC GCGCTGGGGA TTGCGATGCA GTTGACCAAC ATCCTGCGGG ATGTGGCGGA AGATCTCTCG CGGGGTCGCA TCTATCTCCC CGTCGAAGAT CTGCAACGTT TTGGCGTCAC GGCCGACCAT CTCGCGTGCG GCCGCCTTCA CGAGGGTTGG CAGCAACTCC TTCAACACTA CATCGCGCTC GCGCGCCAGC TCTACGAGTA CGCCATCCCT GGCATTCGCC ATCTTGCGCC TGCCGCGCGC GTGCCGGTCG CCTTGGCCGC CGTGTGGTAC CGGGCCATCT TGCGCGATAT CGAACGCCAC GGCGGAGACG TGTTCACACG CCGAGCGCAC GTACCGCTGC TTAGGAAACT CCGCATCGCG TGCTCCCAAG GGTTGCCCGC CGCCTTCGGA TGGAGTATGA GGGCTCGCGC GCGCTCCATG GATACGTCGT TCCACAGCAT TCACTCGCAA CAAGGAGGTG CGCCATGA
|
Protein sequence | MDERVLRFVV EEGRRAAHEL SASPASRWTR LGDLPRVGHI IRQHSKTFSL AARCLPRRSR KAVEAFYAFC RSADDFADHL GEEGKRRLEA YLAAIRGGAP APDPILASWL AIGDGMRIPR RWSESLVETL LADTQRSVVP TLEDLLGYAY GVASTVGLIT TVIVGYRRTS SLEDVFARAI ALGIAMQLTN ILRDVAEDLS RGRIYLPVED LQRFGVTADH LACGRLHEGW QQLLQHYIAL ARQLYEYAIP GIRHLAPAAR VPVALAAVWY RAILRDIERH GGDVFTRRAH VPLLRKLRIA CSQGLPAAFG WSMRARARSM DTSFHSIHSQ QGGAP
|
| |