Gene Aaci_2819 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_2819 
Symbol 
ID8426360 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp2878254 
End bp2879261 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content65% 
IMG OID645028946 
ProductPhytoene synthase 
Protein accessionYP_003186212 
Protein GI258512778 
COG category[I] Lipid transport and metabolism 
COG ID[COG1562] Phytoene/squalene synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGATGAAC GGGTCCTTCG CTTTGTGGTG GAAGAGGGGC GCCGCGCCGC CCATGAGCTG 
TCCGCTTCCC CCGCTTCACG CTGGACGCGC CTAGGGGATC TACCCCGCGT CGGACATATC
ATCCGCCAAC ACAGCAAGAC GTTCAGTCTT GCCGCGCGGT GTCTTCCCAG GCGCTCGCGC
AAGGCGGTGG AAGCCTTCTA CGCCTTCTGC CGATCCGCCG ACGACTTCGC CGACCACCTC
GGTGAAGAGG GCAAGCGACG CCTGGAAGCC TATCTCGCGG CCATTCGCGG CGGCGCGCCC
GCACCGGACC CCATCCTGGC CAGTTGGCTC GCCATCGGCG ATGGCATGCG TATTCCGCGC
CGGTGGAGCG AGTCGCTTGT CGAGACGCTT TTGGCAGATA CCCAGCGCTC CGTGGTCCCC
ACGCTGGAGG ACCTGCTTGG GTACGCGTAC GGTGTCGCGT CCACCGTCGG CCTCATCACG
ACGGTCATCG TCGGCTATCG GCGAACGAGT TCTCTCGAGG ACGTCTTCGC GCGCGCCATC
GCGCTGGGGA TTGCGATGCA GTTGACCAAC ATCCTGCGGG ATGTGGCGGA AGATCTCTCG
CGGGGTCGCA TCTATCTCCC CGTCGAAGAT CTGCAACGTT TTGGCGTCAC GGCCGACCAT
CTCGCGTGCG GCCGCCTTCA CGAGGGTTGG CAGCAACTCC TTCAACACTA CATCGCGCTC
GCGCGCCAGC TCTACGAGTA CGCCATCCCT GGCATTCGCC ATCTTGCGCC TGCCGCGCGC
GTGCCGGTCG CCTTGGCCGC CGTGTGGTAC CGGGCCATCT TGCGCGATAT CGAACGCCAC
GGCGGAGACG TGTTCACACG CCGAGCGCAC GTACCGCTGC TTAGGAAACT CCGCATCGCG
TGCTCCCAAG GGTTGCCCGC CGCCTTCGGA TGGAGTATGA GGGCTCGCGC GCGCTCCATG
GATACGTCGT TCCACAGCAT TCACTCGCAA CAAGGAGGTG CGCCATGA
 
Protein sequence
MDERVLRFVV EEGRRAAHEL SASPASRWTR LGDLPRVGHI IRQHSKTFSL AARCLPRRSR 
KAVEAFYAFC RSADDFADHL GEEGKRRLEA YLAAIRGGAP APDPILASWL AIGDGMRIPR
RWSESLVETL LADTQRSVVP TLEDLLGYAY GVASTVGLIT TVIVGYRRTS SLEDVFARAI
ALGIAMQLTN ILRDVAEDLS RGRIYLPVED LQRFGVTADH LACGRLHEGW QQLLQHYIAL
ARQLYEYAIP GIRHLAPAAR VPVALAAVWY RAILRDIERH GGDVFTRRAH VPLLRKLRIA
CSQGLPAAFG WSMRARARSM DTSFHSIHSQ QGGAP