| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_2816 |
|---|
| Symbol | |
|---|
| ID | 8426357 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013205 |
|---|
| Strand | + |
|---|
| Start bp | 2874924 |
|---|
| End bp | 2876516 |
|---|
| Gene Length | 1593 bp |
|---|
| Protein Length | 530 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 645028943 |
|---|
| Product | FAD dependent oxidoreductase |
|---|
| Protein accession | YP_003186209 |
|---|
| Protein GI | 258512775 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCTCTC GTCCGATTCG CTCCGTGGCA GTTGTAGGCG CAGGCATGGG TGGCCTCACT
GCGTCCCTTT ATCTGGCTCA GCGCGGCCAC GAAGTCTTTC TCCTCGAACG AGCCAAATAC
CCGGGCGGGA CGGCCGGCTT CTACGCAAAG CGCGGTATGG TGTATCCGAC CGGCGCCACG
CTGACGTTCG GGCTTGAACC CGGAGGTCTG TTTGCGTCCA TCCTGCAAGA GGTGGGCGTG
CACCTTCCGC TCTACCCCGT GAACCACGTG ATGGACGTCC GATTGCCGGA TCGGAACGTT
CCGGTGGTCG CGTCCAGAGC GGAATGGTTG GCAGCGCTGA AGACGTCTTT CCCCGAACGC
GCCTCCCAAG TGGTCCGCTT CTGGCGCGCC GTGGAGAAGA CCGCGCAAGC TGCCTATCTG
TTTGCGAAAG CGCGAGCGGC ACTTCCCGTT CAGACTCGGG AAGACTTCCT GCACATTTTG
GCCACGATGG CCGCGAACAA ATCCATGCTT GGCTTTGGTG TCCAACGCCT GCGAGCGACC
GTTGCCGACG CACTGCGAGA GTTCCATCTC GACGACTATG GCCCGTTTCG CCTCTTCATC
GATGCGCAGC TGTTCGACGC GGTTCAGACC ACGAGCGAGT GGGCCGCATG GCTTCCGTCG
TGTCTCGCGC TGGATATCTA CCGATACGGC GTGTGGCTTC CTCAGGGCGG CGTGCCGGCC
TTGGCGGCGG CCATGGCGGA TCGGGCGCGC ACGCTGGGTG TCCATGTGCT GTTTTCGAAC
ACCGTGACCG ACGCCACCTA TTTCCAGGCC TCAAAACAAT GGTGCCTGAG GACGAATCGT
GGACACGAAT TGTGTGTCGA CGCCGTCGTC AACGCGACGG GAACGCGCGT GACGACGCAG
ACCGACGAAC CCGTGAGTGG GGACAACTCA GCATCACAGG TGAGCGGAGC CCAGTGGGGC
GCGGTTCGGA TCGACGCGCT GATGAGCGGA CAGGGAGTTC AAGAAGCGTG GTTTCACCGG
GATGACCCCC GTGCACCTTT CGCCATTCAA ATCGCGGACG ACGCTGGTGT GGACGCCCCT
CATGAAGGGC CGTGCGGTCC CCTTTACATC ACGTTTCATC CGGAAGAACC GGCGGAAGAT
CGCTATGGCG CGCCTACTGG CGATCACGCC ATACGCGTCA CGGTTAGTGC ACACACCCGC
CCTCATGACT GGCTGAACCT CCCGAAGGCG ATGTATCACG AGCGCAAGCA GCGGTGGTTG
CAAGACATGT TCGAGCGCAT CGACCGGCGT CTGCCCCACT TTTCGGAGCA CATGGTCACG
TGCTCGATGG GCACGCCTCT CACGTACGCG CGCTATCTGA ACAAGGCCTG GGTTGGCGGC
GTTCCGCTCA CCGTTGCCAA CGCCATCAGC CGACCGAGAG GTCCGAAGAC GCCTTGGCCG
CGCTGGTACT TGGCGGGAGA CACGGTGTTC CCAGGACCCG GTATGCTGTC CGCAGCCTTG
AGCGGCTTTT TTGCCGCGCG CTCCATTGAT CCGCGGATCG GTCAACGGGC GTACAAGATG
GACGAATCAC CCAGTTCGCT CGTCAGGCGC TGA
|
|---|
| Protein sequence | MRSRPIRSVA VVGAGMGGLT ASLYLAQRGH EVFLLERAKY PGGTAGFYAK RGMVYPTGAT
LTFGLEPGGL FASILQEVGV HLPLYPVNHV MDVRLPDRNV PVVASRAEWL AALKTSFPER
ASQVVRFWRA VEKTAQAAYL FAKARAALPV QTREDFLHIL ATMAANKSML GFGVQRLRAT
VADALREFHL DDYGPFRLFI DAQLFDAVQT TSEWAAWLPS CLALDIYRYG VWLPQGGVPA
LAAAMADRAR TLGVHVLFSN TVTDATYFQA SKQWCLRTNR GHELCVDAVV NATGTRVTTQ
TDEPVSGDNS ASQVSGAQWG AVRIDALMSG QGVQEAWFHR DDPRAPFAIQ IADDAGVDAP
HEGPCGPLYI TFHPEEPAED RYGAPTGDHA IRVTVSAHTR PHDWLNLPKA MYHERKQRWL
QDMFERIDRR LPHFSEHMVT CSMGTPLTYA RYLNKAWVGG VPLTVANAIS RPRGPKTPWP
RWYLAGDTVF PGPGMLSAAL SGFFAARSID PRIGQRAYKM DESPSSLVRR
|
|---|
| |