| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_2786 |
|---|
| Symbol | |
|---|
| ID | 8426327 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013205 |
|---|
| Strand | - |
|---|
| Start bp | 2845898 |
|---|
| End bp | 2846431 |
|---|
| Gene Length | 534 bp |
|---|
| Protein Length | 177 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 645028913 |
|---|
| Product | DNA-directed RNA polymerase delta subunit |
|---|
| Protein accession | YP_003186179 |
|---|
| Protein GI | 258512745 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG3343] DNA-directed RNA polymerase, delta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.797688 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCATCT CATTGGCACG AACGGAACAC GAGATACAGG AAATGCCTCT CGTGGAGCTC
GTGTACGAGA TCTTGAAAGC CCGGAAAGAG CCCATGTACT TCCGCGATAT CATGAAGGAA
ATCCAGGAGC TCCGCCACAT GACCGACGAG CAGGTGGCGG ACGTCATCGC GCGGGTATTC
ACAGAGATCA ACGTCGATGG CCGGTTCGTC TGTATTGGTC ACAATGTGTG GGGGTTGAAT
CGTTGGTATC CGACGGATCG CAACGCCGAG CGCTTGTCGG GCGGCAAGAA GTTCATCCGC
AAGACGGGCG ACGCGTTTGG CGATGAGGAG GACGACGAAG AGGAGTACGA GGAGGAGGAC
GTCCTCGAGG ACGACGAGCT CGACTACGAC GAGGTCGAGG CGGTCGACGA GGAGCCCGAA
TTCGACGACG TCGAGGTCGT GGAAGACGAG GACGAGATCC TGCCAGAAGA CGAATACGAC
GATGCGCCGC TGTTCGACGA AGAGGAGGAA GTCGAGGAAG ACGAGGAGGA CTGA
|
|---|
| Protein sequence | MAISLARTEH EIQEMPLVEL VYEILKARKE PMYFRDIMKE IQELRHMTDE QVADVIARVF
TEINVDGRFV CIGHNVWGLN RWYPTDRNAE RLSGGKKFIR KTGDAFGDEE DDEEEYEEED
VLEDDELDYD EVEAVDEEPE FDDVEVVEDE DEILPEDEYD DAPLFDEEEE VEEDEED
|
|---|
| |